Jatropha Genome Database

JcCB0212851.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0212851.10 - phase: 1 /pseudo
         (237 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29999.m000206 arginine biosynthesis protein argJ 1, putative          385   e-107

>29999.m000206 arginine biosynthesis protein argJ 1, putative
          Length = 469

 Score =  385 bits (988), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 192/218 (88%), Positives = 207/218 (94%)

Query: 1   GVTAAKGFKAAGIYGGLRAQGNKPDLALVTCDVDAAAAGAFTTNMVAAAPVLYCKNALDI 60
           GVTAAKGFKA GIYGGLRA+G KPDLALVTCDVDAAAAG+FTTNMVAAAPVLYCK+ALDI
Sbjct: 66  GVTAAKGFKAVGIYGGLRAKGEKPDLALVTCDVDAAAAGSFTTNMVAAAPVLYCKHALDI 125

Query: 61  SKTARAVLINAGQANAATGDAGYQDVLECADALAKVLNLKQEEVLIESTGVIGHRIKKEA 120
           S+TARAVLINAGQANAATGDAGYQDVLECAD +A +L +K+EEVLIESTGVIG RIKK+A
Sbjct: 126 SQTARAVLINAGQANAATGDAGYQDVLECADTVAMMLKVKREEVLIESTGVIGQRIKKDA 185

Query: 121 LLNALPELVNSLTSSLEGAGSAAVAITTTDLVSKSVAIESQVGDMSVRVGGMAKGSGMIH 180
           LLNALP LVNSLTSS+EGAGSAAVAITTTDLVSKSVAIESQ+G +++RVGGMAKGSGMIH
Sbjct: 186 LLNALPTLVNSLTSSVEGAGSAAVAITTTDLVSKSVAIESQIGGINIRVGGMAKGSGMIH 245

Query: 181 PNMATMLGVITTDALVEADVWRKMVLIAVNRSFNQITV 218
           PNMATMLGVITTDALV+ DVWRKMV  AVNRSFNQITV
Sbjct: 246 PNMATMLGVITTDALVQTDVWRKMVQTAVNRSFNQITV 283