Jatropha Genome Database

JcCB0212401.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0212401.10 - phase: 0 
         (155 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29843.m000285 conserved hypothetical protein                          242   7e-65
30073.m002201 Ethanolamine-phosphate cytidylyltransferase, putative   171   2e-43
27704.m000147 cholinephosphate cytidylyltransferase, putative          70   5e-13

>29843.m000285 conserved hypothetical protein
          Length = 387

 Score =  242 bits (617), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 114/132 (86%), Positives = 120/132 (90%)

Query: 12  KLALVSGLKWVDEVIANSPYAITEQFMNTLFNEHKIDYIIHGDDPCLLPDGTDAYALAKR 71
           +LALVSGLKWVDEVIAN+PYAITEQFMN LFNEHKIDYIIHGDDPCLLPDGTDAYALAKR
Sbjct: 83  RLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKR 142

Query: 72  AGRYKQIKRTEGVSSTDIVGRILSVDDPKVCEAHDDKLPLPRDACKANQSSGAYISQFLP 131
           AGRYKQIKRTEGVSSTDIVGRIL  +D KV E HDDKL LP DACK NQ +  ++SQFLP
Sbjct: 143 AGRYKQIKRTEGVSSTDIVGRILFANDAKVSECHDDKLSLPGDACKGNQCNSVHLSQFLP 202

Query: 132 TSRRIVQFSNGK 143
           TSRRIVQFSNGK
Sbjct: 203 TSRRIVQFSNGK 214


>30073.m002201 Ethanolamine-phosphate cytidylyltransferase, putative
          Length = 418

 Score =  171 bits (432), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 84/139 (60%), Positives = 104/139 (74%), Gaps = 8/139 (5%)

Query: 12  KLALVSGLKWVDEVIANSPYAITEQFMNTLFNEHKIDYIIHGDDPCLLPDGTDAYALAKR 71
           ++ +V+ +KWVDEVI ++PYAITE+FM  LF E+ IDYIIHGDDPC+LPDGTDAYALAK+
Sbjct: 108 RMIMVNAVKWVDEVIPDAPYAITEEFMKKLFEEYNIDYIIHGDDPCVLPDGTDAYALAKK 167

Query: 72  AGRYKQIKRTEGVSSTDIVGR-ILSVDDPKVCEAHDDKLPLPRDACKANQ------SSGA 124
           AGRYKQIKRTEGVSSTDIVGR +L   +  + ++H +   L R     +        +G 
Sbjct: 168 AGRYKQIKRTEGVSSTDIVGRMLLCTRERSISDSHKNS-SLQRQFSHGHSQKFEDGGTGT 226

Query: 125 YISQFLPTSRRIVQFSNGK 143
            +S FLPTSRRIVQFSNGK
Sbjct: 227 RVSHFLPTSRRIVQFSNGK 245


>27704.m000147 cholinephosphate cytidylyltransferase, putative
          Length = 298

 Score = 69.7 bits (169), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 56/92 (60%), Gaps = 6/92 (6%)

Query: 5   NINNNFRKLALVSGLKWVDEVIANSPYAITEQFMNTLFNEHKIDYIIHGDDPCLLPDGT- 63
            + N+  +   +   KWVDEVI ++P+ +T++F++    +H+IDY+ H   P     G  
Sbjct: 65  TVMNDQERYESLRHCKWVDEVIPDAPWVLTQEFLD----KHRIDYVAHDSLPYADASGAG 120

Query: 64  -DAYALAKRAGRYKQIKRTEGVSSTDIVGRIL 94
            D Y   K  G++K+ KRTEG+S++DI+ RI+
Sbjct: 121 NDVYEFVKSIGKFKETKRTEGISTSDIIMRIV 152