Jatropha Genome Database

JcCB0207431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0207431.10 + phase: 2 /partial
         (135 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m011039 C-4 methyl sterol oxidase, putative                     212   3e-56
29751.m001869 C-4 methyl sterol oxidase, putative                     134   1e-32

>30190.m011039 C-4 methyl sterol oxidase, putative
          Length = 243

 Score =  212 bits (540), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 98/129 (75%), Positives = 111/129 (86%)

Query: 1   LLHSKWGYEKIHHVHHQYTAPIGLAAPYAHWAEILILGFPAFLGPALVPGHIITYWLWFI 60
            LH KWGYEKIH VHH+Y APIG AAPYAHWAEILILG P+FLGPA+VPGH+IT+WLW  
Sbjct: 86  FLHGKWGYEKIHSVHHEYAAPIGFAAPYAHWAEILILGIPSFLGPAIVPGHMITFWLWIA 145

Query: 61  LRQIEAIETHSGYDIARSFTKYIPFYGGAEYHDYHHCVGAQSQSNFASIFTYCDYIYGTD 120
           LRQIEAIETHSGYD   + TKYIPFYGGA+YHDYHH VG QSQSNFAS+FTYCD+IYGTD
Sbjct: 146 LRQIEAIETHSGYDFPWTPTKYIPFYGGADYHDYHHYVGGQSQSNFASVFTYCDFIYGTD 205

Query: 121 KVSKTRNEI 129
           K  + + ++
Sbjct: 206 KGYRFQKKV 214


>29751.m001869 C-4 methyl sterol oxidase, putative
          Length = 269

 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 59/120 (49%), Positives = 81/120 (67%)

Query: 1   LLHSKWGYEKIHHVHHQYTAPIGLAAPYAHWAEILILGFPAFLGPALVPGHIITYWLWFI 60
           +LH+KW Y+ +H VHH+Y  P GL + YAH AEIL LGF   +GPA+   H+IT WLW +
Sbjct: 129 ILHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIIGPAITGPHLITLWLWMV 188

Query: 61  LRQIEAIETHSGYDIARSFTKYIPFYGGAEYHDYHHCVGAQSQSNFASIFTYCDYIYGTD 120
           LR +E +E H GY    S + ++P YGGA++HDYHH +      N++S F Y D+I+GTD
Sbjct: 189 LRVLETVEAHCGYHFPWSLSNFMPLYGGADFHDYHHRLLYTKSGNYSSTFIYMDWIFGTD 248