Jatropha Genome Database

JcCB0205901.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0205901.10 + phase: 0 /partial
         (640 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29585.m000607 2-oxoglutarate dehydrogenase, putative                 1282   0.0  
29585.m000605 oxoglutarate dehydrogenase, putative                    377   e-104
29585.m000604 2-oxoglutarate dehydrogenase, putative                  296   1e-80
36292.m000013 oxoglutarate dehydrogenase, putative                    157   1e-38
29585.m000606 hypothetical protein                                    144   9e-35
29736.m002097 pyruvate dehydrogenase, putative                         50   3e-06

>29585.m000607 2-oxoglutarate dehydrogenase, putative
          Length = 1021

 Score = 1282 bits (3317), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 609/640 (95%), Positives = 626/640 (97%)

Query: 1   MAWFRAGTNVARLAIKRTLCQSGSYTTRVRFIPSQSRYFHTTVFKSKAQTAPVPRPVPLS 60
           MAWFRAG +VARLAI+RTL QSGSYT R R +PSQ+RYFHTTVFKSKAQ APVPRPVPLS
Sbjct: 1   MAWFRAGASVARLAIRRTLSQSGSYTVRTRVVPSQNRYFHTTVFKSKAQAAPVPRPVPLS 60

Query: 61  RLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQAATSPGISGQTIQESMR 120
           RLTDSFLDGTSSVYLEELQRAWEADP+SVDESWDNFFRNFVGQAATSPGISGQTIQESMR
Sbjct: 61  RLTDSFLDGTSSVYLEELQRAWEADPSSVDESWDNFFRNFVGQAATSPGISGQTIQESMR 120

Query: 121 LLLLVRAYQVNGHMKAKLDPLGLEEREIPEDLDPALYGFTEADLDREFFLGVWRMSGFLS 180
           LLLLVRAYQVNGHMKAKLDPLGLEEREIPEDLDPALYGF EADLDREFFLGVWRMSGFLS
Sbjct: 121 LLLLVRAYQVNGHMKAKLDPLGLEEREIPEDLDPALYGFAEADLDREFFLGVWRMSGFLS 180

Query: 181 ENRPVQTLRSILTRLEQAYCGSIGFEYMHIADRDKCNWLRDKIETPTPMQYNRQRREVIL 240
           ENRPVQTLRSILTRLEQAYCGSIG+EYMHIADRDKCNWLRDKIETPTPMQYNRQRREVIL
Sbjct: 181 ENRPVQTLRSILTRLEQAYCGSIGYEYMHIADRDKCNWLRDKIETPTPMQYNRQRREVIL 240

Query: 241 DRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRSADLGVESIVIGMPHRGRL 300
           DRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRSADLGVESIVIGMPHRGRL
Sbjct: 241 DRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRSADLGVESIVIGMPHRGRL 300

Query: 301 NVLGNVVRKPLRQIFSEFSGGTKPVDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLV 360
           NVLGNVVRKPLRQIFSEFSGGTKPVDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLV
Sbjct: 301 NVLGNVVRKPLRQIFSEFSGGTKPVDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLV 360

Query: 361 ANPSHLEAVDPVVVGKTRAKQYYSQDADRTKNMGILIHGDGSFAGQGVVYETLHLSALPN 420
           ANPSHLEAVDPVVVGKTRAKQYYS D DR KNMGILIHGDGSFAGQGVVYETLHLSALPN
Sbjct: 361 ANPSHLEAVDPVVVGKTRAKQYYSNDEDRIKNMGILIHGDGSFAGQGVVYETLHLSALPN 420

Query: 421 YTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDVAKALNAPIFHVNGDDVEAVVHACELAA 480
           Y+TGGTIHIVVNNQVAFTTDP AGRSSQYCTDVAKALNAPIFHVNGDDVEAVVHACELAA
Sbjct: 421 YSTGGTIHIVVNNQVAFTTDPTAGRSSQYCTDVAKALNAPIFHVNGDDVEAVVHACELAA 480

Query: 481 EWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYQVIRNHPSALEIYQRKLLESGQVG 540
           EWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYQVIRNHPS+L+IY+ KLLESGQVG
Sbjct: 481 EWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYQVIRNHPSSLQIYKNKLLESGQVG 540

Query: 541 DEDIKKIQKKVITILNEEFLASKDYVPKRRDWLSSHWAGFKSPEQLSRVRNTGVKPEILK 600
           +EDI +IQ+KVITILNEEFLASKDYVPKRRDWLSSHWAGFKSPEQLSR+RNTGV+PEILK
Sbjct: 541 EEDISRIQEKVITILNEEFLASKDYVPKRRDWLSSHWAGFKSPEQLSRIRNTGVQPEILK 600

Query: 601 NVGKAITTLPENFKPHRAVKKVYEHRAQMIETGEGIDWAV 640
           NVGKAITT+P+NFKPHRAVKKVYE RAQMIETGEGIDWAV
Sbjct: 601 NVGKAITTIPDNFKPHRAVKKVYEQRAQMIETGEGIDWAV 640


>29585.m000605 oxoglutarate dehydrogenase, putative
          Length = 244

 Score =  377 bits (967), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 188/273 (68%), Positives = 207/273 (75%), Gaps = 33/273 (12%)

Query: 119 MRLLLLVRAYQVNGHMKAKLDPLGLEEREIPEDLDPALYGFTEADLDREFFLGVWRMSGF 178
           MRLLLLVRAYQV+GH KA LDPL LEE EIP+DLDPA +GF EADLDREFFLGVW  SGF
Sbjct: 1   MRLLLLVRAYQVHGHTKANLDPLDLEESEIPDDLDPAFHGFAEADLDREFFLGVWNTSGF 60

Query: 179 LSENRPVQTLRSILTRLEQAYCGSIGFEYMHIADRDKCNWLRDKIETPTPMQYNRQRREV 238
            S N  V TL SILTRLEQAYCG I +EYMHI +R+KCNWLRD+IETP P++Y+ + R+ 
Sbjct: 61  SSNNGSVMTLLSILTRLEQAYCGHIRYEYMHIDNREKCNWLRDRIETPEPVRYSLRWRD- 119

Query: 239 ILDRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRSADLGVESIVIGMPHRG 298
                                            IPGMKEMFDR++DLGVE+IV+GMPHRG
Sbjct: 120 --------------------------------FIPGMKEMFDRASDLGVENIVVGMPHRG 147

Query: 299 RLNVLGNVVRKPLRQIFSEFSGGTKPVDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLS 358
           RLNVLGNV RKPL QIFSEF    K VDEVGLY GTGDVKYHL TSYDRPTR G+RIHLS
Sbjct: 148 RLNVLGNVFRKPLAQIFSEFDKNAKTVDEVGLYKGTGDVKYHLKTSYDRPTRAGRRIHLS 207

Query: 359 LVANPSHLEAVDPVVVGKTRAKQYYSQDADRTK 391
           LVANPS LEAVDPVV+GKTRAKQYY+ DADRTK
Sbjct: 208 LVANPSRLEAVDPVVLGKTRAKQYYTDDADRTK 240


>29585.m000604 2-oxoglutarate dehydrogenase, putative
          Length = 529

 Score =  296 bits (759), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 134/185 (72%), Positives = 160/185 (86%)

Query: 422 TTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDVAKALNAPIFHVNGDDVEAVVHACELAAE 481
           TTGGTIHIVVNNQVAFTTDPR+GRSS+YCTDVA ALNAPIFHVNGDD+EAV H CELAAE
Sbjct: 11  TTGGTIHIVVNNQVAFTTDPRSGRSSRYCTDVALALNAPIFHVNGDDMEAVAHVCELAAE 70

Query: 482 WRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYQVIRNHPSALEIYQRKLLESGQVGD 541
           WRQTFHSDVVVD++CYRRFGHN++DEPSFTQPKMY+VI+ HPS+L+IY+ K LESG+V +
Sbjct: 71  WRQTFHSDVVVDIICYRRFGHNKVDEPSFTQPKMYKVIQKHPSSLKIYENKFLESGEVTE 130

Query: 542 EDIKKIQKKVITILNEEFLASKDYVPKRRDWLSSHWAGFKSPEQLSRVRNTGVKPEILKN 601
           E   +I +KV  ILNEE+  SK Y  K R+WLSS W+GFKSPEQ+S++RNTG+  ++LK 
Sbjct: 131 EVTDRIHRKVNRILNEEYSNSKYYSGKTREWLSSQWSGFKSPEQISQIRNTGINRDVLKT 190

Query: 602 VGKAI 606
           VG  +
Sbjct: 191 VGSHV 195


>36292.m000013 oxoglutarate dehydrogenase, putative
          Length = 276

 Score =  157 bits (398), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 77/193 (39%), Positives = 126/193 (65%), Gaps = 9/193 (4%)

Query: 113 QTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEER-EIPEDLDPALYGFTEADLDREFFLG 171
           Q  ++S+R ++++RAY++ GH+ AKLDPLG+    E  ++L P  YGFTEAD DR+ F+ 
Sbjct: 89  QATRDSVRAIMMIRAYRMRGHLHAKLDPLGIAAPVEDYKELSPEAYGFTEADFDRKIFID 148

Query: 172 VWRMSGFLSENRPVQTLRSILTRLEQAYCGSIGFEYMHIADRDKCNWLRDKIETPTP-MQ 230
              + G         T+R ++  LE+ YC ++G E+MHI++ ++  W++++IE P   + 
Sbjct: 149 --NVLGL-----EFATIREMIEILERTYCSTLGVEFMHISNPEEKAWIQERIEGPDKGIA 201

Query: 231 YNRQRREVILDRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRSADLGVESI 290
           +N +R++ IL ++I +  +E FL  K+   KRFGL+GGE+LIP ++++    + LG+   
Sbjct: 202 FNPERKKAILQKVIEAEGYEQFLDVKFKGTKRFGLDGGESLIPALEQILKSGSQLGLREA 261

Query: 291 VIGMPHRGRLNVL 303
           V GM HRGRLNVL
Sbjct: 262 VFGMAHRGRLNVL 274


>29585.m000606 hypothetical protein
          Length = 102

 Score =  144 bits (364), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 65/102 (63%), Positives = 82/102 (80%)

Query: 1   MAWFRAGTNVARLAIKRTLCQSGSYTTRVRFIPSQSRYFHTTVFKSKAQTAPVPRPVPLS 60
           MAWFRA   VAR+AI+++L Q+GSY TR++  PSQ+R F +T+F+   Q A   R V L 
Sbjct: 1   MAWFRAANTVARIAIRKSLSQNGSYATRIQSFPSQNRSFRSTIFRPNLQPAATTRSVQLF 60

Query: 61  RLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVG 102
            LTD+FLDG+SS+YLEELQRAWEA+PNS+DESWDNFF+NFVG
Sbjct: 61  GLTDNFLDGSSSLYLEELQRAWEANPNSIDESWDNFFKNFVG 102


>29736.m002097 pyruvate dehydrogenase, putative
          Length = 399

 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 93/185 (50%), Gaps = 12/185 (6%)

Query: 383 YSQDADRTKNMGILIHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAF-TTDP 441
           ++Q  ++ + +   ++GDG+ A QG ++E L++SAL +      I +  NN     T + 
Sbjct: 189 FAQKYNKDETVTFALYGDGA-ANQGQLFEALNISALWDLPV---ILVCENNHYGMGTAEW 244

Query: 442 RAGRSSQYCTDVAKALNAPIFHVNGDDVEAVVHACELAAEWRQTFHSDVVVDLVCYRRFG 501
           RA +S  Y     +    P   V+G DV AV  AC+ A E+    +  +++++  YR  G
Sbjct: 245 RAAKSPAY---YKRGDYVPGLKVDGMDVLAVKQACKFAKEFVLK-NGPLILEMDTYRYHG 300

Query: 502 HNEIDEPSFTQPKMYQV--IRNHPSALEIYQRKLLESGQVGDEDIKKIQKKVITILNEEF 559
           H+ + +P  T     ++  +R     +E  ++ +L      ++++K ++K++   +++  
Sbjct: 301 HS-MSDPGSTYRTRDEISGVRQERDPIERIRKVILAHDLATEKELKDMEKEIRKEIDDAI 359

Query: 560 LASKD 564
             +K+
Sbjct: 360 AQAKE 364