Jatropha Genome Database

JcCB0203531.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0203531.20 - phase: 0 
         (269 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29927.m000629 conserved hypothetical protein                          149   1e-36
29841.m002853 conserved hypothetical protein                          145   2e-35
30054.m000806 conserved hypothetical protein                          114   6e-26
29637.m000738 conserved hypothetical protein                          104   4e-23
30008.m000801 o-linked n-acetylglucosamine transferase, ogt, put...    99   3e-21
29669.m000812 conserved hypothetical protein                           83   1e-16
29681.m001321 conserved hypothetical protein                           69   3e-12

>29927.m000629 conserved hypothetical protein
          Length = 292

 Score =  149 bits (377), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/262 (35%), Positives = 132/262 (50%), Gaps = 38/262 (14%)

Query: 1   MLLRSTSTPLLKTYVCQLSTPEPDPGS-------PRPVSLS------------------- 34
           MLLRS STP+L ++      P+P+P S       PR ++L+                   
Sbjct: 1   MLLRSASTPILNSW-----KPQPEPESFHQIQKAPRSITLTACCNSSSSLSSSSYTSEDS 55

Query: 35  ---LERTSSDGELKLLSLVREKMLTKSPARSGRAVVFKEEKSVCMETAXXXXXXXXXXXX 91
              + R  S+ +LK  S++++K    +    G  + F+EE      T             
Sbjct: 56  VKKMTRALSETDLKQFSVLKKKQPINNIIMDG--ITFEEEVEADQMTFSGSGLSLDSSFL 113

Query: 92  XXXIEEEE--RMVXXXXXXXXXXXXXXXXXXXXXXXXFWDLSHERMDNYYQIMIETYPGD 149
               EE E  ++                                  D YYQ MIE  PG+
Sbjct: 114 FNEEEECEVGKIQDNGLSAFVGGGVGGGGKICGAGDSGGRGGDGSTDLYYQNMIEANPGN 173

Query: 150 ALLLANYAKFLKEVRGDNVKAEKVCEKALMANARDGDVLSMYGDLIWNNHKDNARAQTYF 209
           +L L+NYA+FLKEVRGD +KAE+  E+A++AN  DG+ LSMY DLIW +HKD +RA+TYF
Sbjct: 174 SLFLSNYARFLKEVRGDFIKAEEYYERAILANPSDGNSLSMYADLIWQSHKDASRAETYF 233

Query: 210 DEAVQSSPDDCYVLASYARFLW 231
           D+AV++SPDDC++LASYARFLW
Sbjct: 234 DQAVKASPDDCFILASYARFLW 255


>29841.m002853 conserved hypothetical protein
          Length = 305

 Score =  145 bits (367), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 63/100 (63%), Positives = 80/100 (80%)

Query: 132 HERMDNYYQIMIETYPGDALLLANYAKFLKEVRGDNVKAEKVCEKALMANARDGDVLSMY 191
           +E  D YYQ MI   PG+ALLL NYAKFLKEV+GD  KAE+ C +A++AN  DG+VLS+Y
Sbjct: 171 NESTDAYYQKMISADPGNALLLGNYAKFLKEVKGDFAKAEEFCGRAILANPSDGNVLSVY 230

Query: 192 GDLIWNNHKDNARAQTYFDEAVQSSPDDCYVLASYARFLW 231
            DLIW   KD  RA++YFD+AV+++P+DC+VLASYARFLW
Sbjct: 231 ADLIWQKEKDAERAESYFDQAVKTAPEDCFVLASYARFLW 270


>30054.m000806 conserved hypothetical protein
          Length = 268

 Score =  114 bits (284), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 52/106 (49%), Positives = 75/106 (70%), Gaps = 2/106 (1%)

Query: 129 DLSHERMDNYYQIMIETYPGDALLLANYAKFLKEVRGDNVKAEKVCEKALMANARDGDVL 188
           DLS  ++ +YY  M+++ P D+LLL NY KFL EV GD  +AE+   +A++A   DG+VL
Sbjct: 144 DLS--KIGDYYTEMLKSNPNDSLLLRNYGKFLHEVEGDMERAEEYYGRAILAGPGDGEVL 201

Query: 189 SMYGDLIWNNHKDNARAQTYFDEAVQSSPDDCYVLASYARFLWDAG 234
           S+YG LIW+  +D  RA+ YFD+AV ++P DC V+ SYA F+W+A 
Sbjct: 202 SLYGKLIWDRQRDGERAKAYFDQAVSAAPHDCMVMGSYAHFMWEAE 247


>29637.m000738 conserved hypothetical protein
          Length = 373

 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 46/105 (43%), Positives = 72/105 (68%)

Query: 138 YYQIMIETYPGDALLLANYAKFLKEVRGDNVKAEKVCEKALMANARDGDVLSMYGDLIWN 197
           YY+ M++  PG+ L L NYA+FL + + D  +AE+   +A++A+ +DGD+LS Y  L+W 
Sbjct: 248 YYKKMLQENPGNPLFLRNYAQFLYQTKRDLQRAEEYYSRAILADPKDGDILSQYAKLVWE 307

Query: 198 NHKDNARAQTYFDEAVQSSPDDCYVLASYARFLWDAGEEEEEKEI 242
            H D  +A +YF  AVQ+SP+D +V A+YA FLW+  E+E+E  +
Sbjct: 308 LHHDLDKASSYFKRAVQASPEDSHVHAAYASFLWETEEDEDESVV 352


>30008.m000801 o-linked n-acetylglucosamine transferase, ogt,
           putative
          Length = 502

 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 76/117 (64%), Gaps = 8/117 (6%)

Query: 135 MDNYYQIMIETYPGDALLLANYAKFLKEVRGDNVKAEKVCEKALMANARDGDVLSMYGDL 194
           ++ YY+ M+E  P ++L+L NYA+FL + +GD   AE+   +AL+A+  DG++ S Y  L
Sbjct: 376 VEEYYKKMVEENPSNSLVLRNYAQFLYQAKGDIRGAEEYYSRALLADPGDGEIKSQYAKL 435

Query: 195 IWNNHKDNARAQTYFDEAVQSSPDDCYVLASYARFLWDAGEEEEEKEIQLSNLSTCA 251
           +W   +D  +A +YF++AVQ++P +  VLA+YA FLW+  E EE+        STC+
Sbjct: 436 VWELGRDRDKASSYFEQAVQAAPGNSNVLAAYASFLWETEENEED--------STCS 484



 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 72/115 (62%), Gaps = 6/115 (5%)

Query: 135 MDNYYQIMIETYPGDALLLANYAKFLKEVRGDNVKAEKVCEKALMANARDGDVLSMYGDL 194
           ++ YY+ M++ +P   L LANYA+ L+  +GD   AE+   +A +A+  DG++L  Y  L
Sbjct: 241 LEEYYKRMVDEFPCHPLFLANYAQLLQS-KGDLHGAEEYYYRATVADPEDGEILMKYAKL 299

Query: 195 IWNNHKDNARAQTYFDEAVQSSPDDCYVLASYARFLWDA---GEEE--EEKEIQL 244
            W  H D  RA + F+ A+Q++P D +VLA+YA FLW+    GEE+  + K IQL
Sbjct: 300 EWQLHHDQDRAWSNFERAIQAAPQDSHVLAAYASFLWEIDGDGEEDRWQTKHIQL 354


>29669.m000812 conserved hypothetical protein
          Length = 502

 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 64/105 (60%)

Query: 133 ERMDNYYQIMIETYPGDALLLANYAKFLKEVRGDNVKAEKVCEKALMANARDGDVLSMYG 192
            R D  YQ+ +   P + LLL+NYA+FL +V  D  +AE+  ++A+M+   D +  S Y 
Sbjct: 385 HRTDILYQMGVAEDPDNTLLLSNYAQFLYKVCRDYDRAEECFKRAIMSGPPDAETFSRYA 444

Query: 193 DLIWNNHKDNARAQTYFDEAVQSSPDDCYVLASYARFLWDAGEEE 237
           D +W   KD   A+  + +A++++PD+ Y L+ YA+FLW  G E+
Sbjct: 445 DFLWLVRKDLWNAEEVYQQALEAAPDNHYYLSKYAKFLWSTGGED 489


>29681.m001321 conserved hypothetical protein
          Length = 546

 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 52/100 (52%)

Query: 138 YYQIMIETYPGDALLLANYAKFLKEVRGDNVKAEKVCEKALMANARDGDVLSMYGDLIWN 197
           +YQ  +   P + LLL NYA+FL  V  D  +AE+  ++A+     D +  S Y   +W 
Sbjct: 433 FYQTGLSQDPNNPLLLTNYAQFLCLVAQDYDRAEEYFKRAIAVEPPDAEAYSKYASFLWR 492

Query: 198 NHKDNARAQTYFDEAVQSSPDDCYVLASYARFLWDAGEEE 237
              D   A+  F EA+ + P + Y   +YA FLW+ G E+
Sbjct: 493 VRNDLWAAEETFLEAINADPTNTYYAGNYAHFLWNTGGED 532