Jatropha Genome Database

JcCB0203341.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0203341.10 + phase: 0 /partial
         (127 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m008853 arginase, putative                                      226   2e-60
34323.m000030 Proclavaminate amidinohydrolase, putative                48   1e-06

>30174.m008853 arginase, putative
          Length = 338

 Score =  226 bits (576), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 112/127 (88%), Positives = 116/127 (91%)

Query: 1   RPFQGGFGSITKEGRGQGKRFGVDQYEMGPFSRDPQLLENLKLGEGAKGVYISIDVDCLD 60
           R  Q G  SITKEGR QGK++GV+Q+EM  FSRD Q LENLKLGEG KGVYISIDVDCLD
Sbjct: 212 RLLQVGIRSITKEGREQGKKYGVEQFEMRTFSRDRQFLENLKLGEGVKGVYISIDVDCLD 271

Query: 61  PAFAPGVSHIEPGGLSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRE 120
           PAFAPGVSHIEPGGLSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRE
Sbjct: 272 PAFAPGVSHIEPGGLSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRE 331

Query: 121 LTAKISK 127
           LTAKISK
Sbjct: 332 LTAKISK 338


>34323.m000030 Proclavaminate amidinohydrolase, putative
          Length = 146

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 4/66 (6%)

Query: 45  EGAKGVYISIDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNL--QADVVAADVVEFNPQ 102
           EGA+ V +++D D +DP   PGV+   PGGL++  +++++  L  +AD+   D+VE  P 
Sbjct: 80  EGAR-VVVTLDCDSIDPGIMPGVAARSPGGLTYTQIIDLIAGLGRRADIAGFDLVELYPP 138

Query: 103 RDTVDG 108
            D +DG
Sbjct: 139 AD-IDG 143