Jatropha Genome Database

JcCB0201931.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0201931.20 + phase: 0 /partial
         (179 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30180.m001067 protein-s isoprenylcysteine O-methyltransferase, p...    97   3e-21

>30180.m001067 protein-s isoprenylcysteine O-methyltransferase,
           putative
          Length = 294

 Score = 97.4 bits (241), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 46/48 (95%), Positives = 47/48 (97%)

Query: 103 LAGGIVALGKFDALHIGHRELAIQASKVGSPYLLSFVGMAEVLGWEPR 150
           LAGGIVALGKFDALHIGHRELAIQASKVG+PYLLSFVGMAEV GWEPR
Sbjct: 19  LAGGIVALGKFDALHIGHRELAIQASKVGTPYLLSFVGMAEVFGWEPR 66