Jatropha Genome Database

JcCB0200941.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0200941.10 + phase: 0 
         (739 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28355.m000100 hypothetical protein                                   1188   0.0  
30190.m010805 conserved hypothetical protein                          504   e-143
29729.m002384 hypothetical protein                                     59   6e-09
29676.m001681 GTP-binding  protein alpha subunit, gna, putative        54   4e-07
29851.m002477 GTP-binding  protein alpha subunit, gna, putative        54   4e-07
30068.m002662 GTP-binding  protein alpha subunit, gna, putative        52   7e-07
28613.m000141 GTP-binding  protein alpha subunit, gna, putative        52   9e-07

>28355.m000100 hypothetical protein
          Length = 916

 Score = 1188 bits (3074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 580/744 (77%), Positives = 632/744 (84%), Gaps = 8/744 (1%)

Query: 1   MSGWQHGDRDEMEGFRRVMRTEVEGVRFSTSNYPDEGPSNYNLDSSYSYGEPLRNHGSHD 60
           MSG + G+R EMEGFRRVMR EVEGVRFSTSNY DEGPSNYNLDSSY YG+PLR H   D
Sbjct: 159 MSGRERGERSEMEGFRRVMRAEVEGVRFSTSNYLDEGPSNYNLDSSYIYGQPLRKHDDLD 218

Query: 61  GPNRVQHLEKDRAELLRKLDELKEQLSRSYEVADKPKEKIPLNGRMAPSDPYVGS--DTW 118
           G +R Q+LEKDRAELLRKLDELKEQLSRS +VADKPKEK+PLNGRM  SDP  GS  DTW
Sbjct: 219 GTSRAQYLEKDRAELLRKLDELKEQLSRSCDVADKPKEKVPLNGRMGQSDPCTGSASDTW 278

Query: 119 FPSASSMPDRTSMQFLAPDKHATRXXXXXXXXXXXXCTNGHEMAMHNFHPSMHKSNHIPG 178
           FP  SSMPDR SMQF   DKHA R             TNGHEM+MHNFHPSMHKSNHIPG
Sbjct: 279 FPGGSSMPDRASMQFFGADKHAGRPPYFHHLPDSFPYTNGHEMSMHNFHPSMHKSNHIPG 338

Query: 179 FGDPFGLKRAPPQLSGQYKQPPRQYFSRHHXXXXXXXXXXYTSNATFHQPSCSCFHCFER 238
           FGDPFGLK AP QLSGQY  P  QYFSRH+          YTSN+ FHQPSCSCFHC+ER
Sbjct: 339 FGDPFGLKTAPHQLSGQY--PSHQYFSRHYFDINSDPFGPYTSNSNFHQPSCSCFHCYER 396

Query: 239 HHGVSAPVPPSAFSNKRFPDVSNNPMFYQHENPGAFGPHNHDPRATVPPPLNFRGPQSYT 298
           HHGVSAPVPP+AFSNKRFPDV NNPM YQHEN GAF PH H+ R TVPPPL+FRG QS+ 
Sbjct: 397 HHGVSAPVPPTAFSNKRFPDVLNNPMLYQHENRGAFAPHVHNSRTTVPPPLDFRGAQSHA 456

Query: 299 RWPSDLNSEMCGFVRYRPRRVVLASGGRCCHPIAGGAPFFTCFNCFGLLQVPKKVLFMGK 358
           RWPSDLNSEM GFVR RPRRVVLA GG CC P+AGGAPFF+CFNCF +LQVPKKVL MGK
Sbjct: 457 RWPSDLNSEMGGFVRCRPRRVVLAGGGCCCQPMAGGAPFFSCFNCFEVLQVPKKVLLMGK 516

Query: 359 NQQKIRCGACSTVINFAVVNKKLVLSVNTEATHFPTEVNDSSTEIIKDSTSYSHGQMSRI 418
           NQQKI+CGACSTVI+FAVVNKKLVLS+NTE T  P EV++SSTE+IK+STSYSH  MSR+
Sbjct: 517 NQQKIQCGACSTVIDFAVVNKKLVLSINTEVTQVPIEVDNSSTEMIKESTSYSHDHMSRM 576

Query: 419 NANFSSDDYDNSGYDFQTIDSEPNAFLTGQGLNSIKHQEMNSFHTSSLSTSEDENSPDAL 478
           N NFSSDDYDNSGYDFQ +D++P A L+GQGLNS+KHQEMN FHTSSLSTSEDENSPDAL
Sbjct: 577 NTNFSSDDYDNSGYDFQIVDTDPIALLSGQGLNSMKHQEMNGFHTSSLSTSEDENSPDAL 636

Query: 479 IAPREVINSVQEPIKXXXXXXXXXXXXQQHFDFSS-NNNVVNRLGKGNRSSRSDQEKVIT 537
           IAPRE+INS Q+PIK            QQHFDFSS NNN VNR GKGNRSSRSDQEKV+T
Sbjct: 637 IAPREIINSAQQPIKASLSPPPPGSPLQQHFDFSSNNNNAVNRFGKGNRSSRSDQEKVMT 696

Query: 538 -NKGAARQNSMKEASLATEIEVPFHEYANTGVSQDSGDANREDSQLKINKGSDSFFANII 596
            NK   RQNSMK++SLATEIEVPFHEY++TGVSQDSGDANRED+QLK++KG DSFFAN I
Sbjct: 697 NNKATTRQNSMKDSSLATEIEVPFHEYSHTGVSQDSGDANREDNQLKVSKGGDSFFAN-I 755

Query: 597 KKSFKDFSRSNQ-DERGRSNVSVNGHIIPDRLVKKAEKLAGPIHPGKYWYDARAGFWGVI 655
           KKSFKD SRSNQ D+R RSNVSVNGH IPDRLVKKAEKLAGPIHPG+YWYD+R GFWGVI
Sbjct: 756 KKSFKDLSRSNQIDDRSRSNVSVNGHFIPDRLVKKAEKLAGPIHPGQYWYDSRGGFWGVI 815

Query: 656 GGPCLGIIPPFIEEFDYPMPEDCAGGNTGVFVNGRELHQKDLDLLTGRGLPIDRDRSYIV 715
           GGPCLGIIPPFIEEF+YPMPEDCAGGNT V+VNGRELHQKDL+LL+GRGLP D+DRSYI+
Sbjct: 816 GGPCLGIIPPFIEEFNYPMPEDCAGGNTSVYVNGRELHQKDLELLSGRGLPADKDRSYII 875

Query: 716 EISGRVLDEETGEELDSLGKLAPT 739
           EISGRVLDE+TG+ELDSLGKLAPT
Sbjct: 876 EISGRVLDEDTGKELDSLGKLAPT 899


>30190.m010805 conserved hypothetical protein
          Length = 934

 Score =  504 bits (1299), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 311/727 (42%), Positives = 416/727 (57%), Gaps = 59/727 (8%)

Query: 31  SNYPDEGPSNYNL--DSSYSYGEPLRNHGSHDGPNRVQHLEKDRAELLRKLDELKEQLSR 88
           ++YPDEGPSNYN    SS+ +G+ L+N       NR +HLE DRAEL+RKLDELKEQ+ R
Sbjct: 232 ASYPDEGPSNYNYVKSSSHGHGQLLKNFD-----NRFEHLEPDRAELIRKLDELKEQICR 286

Query: 89  SYEVADKPKEKIPLNGRMAPSDPYVGSDTWFPSASSMPDRTSMQFLAPDKHATRXXXXXX 148
           S   A+K       N   AP +        FP          ++ LAPDKH  R      
Sbjct: 287 SSSAAEKQTPPGFYNHDRAPYN--------FP----------VKPLAPDKHVPRPLYFRQ 328

Query: 149 XXXXXXCTNGHEMAMHNFH-PSMHKSNHIPGFGDPFGLKR-------APPQLSGQYKQPP 200
                   N  +M M NF+ P  H +N  P + +   L+        AP + S   +QP 
Sbjct: 329 NDYGHVVRNSEDMNMQNFYFPPKHNANKFPVYKNSVQLQMPRSDSHPAPDRYS---QQPL 385

Query: 201 RQYFSRHHXXXXXXXXXXYTSNATFHQPSCSCFHCFERHHGVSAPVPPSAFSNKRF---P 257
           R Y+   H          Y     +H+P+C+CFHC+ +   V + VP S F  K F   P
Sbjct: 386 RDYYLGTHEGFDREPLASYPRGTMYHKPACACFHCYNKKWHVPSQVPASVFGRKYFMEEP 445

Query: 258 DVSNNPMFYQHENPGAFGPH---NHDPRATVPPPLNFRGPQSYTRWPSDLNSEMCGFVRY 314
            VSN      H    +  P    NH  RA     L+ R  QS   WPSD++S M  F   
Sbjct: 446 TVSNFNHQVDHIKSRSGNPTPQVNH--RA-----LHSRDAQSDIGWPSDIDSNMDVFRHS 498

Query: 315 RPRRVVLASG-GRCCHPIAGGAPFFTCFNCFGLLQVPKKVLFMGKNQQKIRCGACSTVIN 373
              RVV+A G GR CHPI GGAPF  C +CF  L++P+K     KNQQK++CGACSTV+ 
Sbjct: 499 HLGRVVVAHGDGRICHPITGGAPFIACSSCFESLKLPRKCKLREKNQQKLQCGACSTVLF 558

Query: 374 FAVVNKKLVLSVNTEATHFPTEVNDSSTEIIKDSTSYSHGQMSRINANFSSDDYDNSGYD 433
             + NKKLV+S+  +      E  D S     +      G  +    N S D  DN GYD
Sbjct: 559 IEIRNKKLVMSIPVKNKQILAEAADGSR---GEGLWSPEGDFNAEGTNCSVD-LDNVGYD 614

Query: 434 FQTIDSEPNAFLTGQGLNSIKHQEMNSFHTSSLSTSEDENSPDALIAPREVINSVQEPIK 493
           FQ+ D + N     + LN  + +  +S  + S  +S ++   D++I  R++ +  + P K
Sbjct: 615 FQSADFKGNVLPEDRRLNLNESRARHSLTSLSSVSSGEDKITDSMIVQRDLSDFPELPTK 674

Query: 494 XXXXXXXXXXXXQQHFDFSSNNNVVNRLGKGNRSSRSDQEKVITNKGAARQNSMKEASLA 553
                        +  D  S+NN +NR G+G+ S++    +VI +K A R+N++   S  
Sbjct: 675 DDTSSTYLRPLFMESLDDISSNNKINRNGEGDESNK----EVILDKDACRENNLNNISSE 730

Query: 554 TEIEVPFHEYANTGVSQDSGDANREDSQLKINKGSDSFFANIIKKSFKDFSRSNQ-DERG 612
           TE+EV F E+ NT  SQDS + ++ED Q +INKGS+SF   ++KKSF+DFSRSNQ +E  
Sbjct: 731 TEVEVSFSEFLNTTTSQDSLEVSKEDLQPRINKGSESFLVGLLKKSFRDFSRSNQHNEYE 790

Query: 613 RSNVSVNGHIIPDRLVKKAEKLAGPIHPGKYWYDARAGFWGVIGGPCLGIIPPFIEEFDY 672
           + NV VNG  IPD +VKKAEKLAGPIHPG YWYD++AGFWG++G PCLGIIPP I+EF+Y
Sbjct: 791 KPNVFVNGQPIPDSMVKKAEKLAGPIHPGDYWYDSQAGFWGLMGQPCLGIIPPCIKEFNY 850

Query: 673 PMPEDCAGGNTGVFVNGRELHQKDLDLLTGRGLPIDRDRSYIVEISGRVLDEETGEELDS 732
           PMPE+C+ GNT VFVNGRELHQKDLDLL  RGLP  +++ YI+EISGRV ++++G+EL S
Sbjct: 851 PMPENCSLGNTSVFVNGRELHQKDLDLLKSRGLPTTKEKFYIIEISGRVFEKDSGKELKS 910

Query: 733 LGKLAPT 739
           LGKLAPT
Sbjct: 911 LGKLAPT 917


>29729.m002384 hypothetical protein
          Length = 878

 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 19/157 (12%)

Query: 230 CSCFHCFERHHGVSAPVPPSAFS-NKRFPDVSNNPMFYQHENPGAFGPHNHDPRATVPP- 287
           CSC   ++R    SA VP S    NK F D+ +    Y      ++G     P+  +   
Sbjct: 576 CSCPQDWQR----SAQVPSSLLHHNKGFCDIHSRFNLY-----NSYGSCPSSPQRYIDSE 626

Query: 288 -PLNFRGPQSYTRWPSDLNSEMCGFVRYRPRRVVLASGGRCCHPIAGGAPFFTCFNCFGL 346
            P   RG +S  +   D   E+  ++R +     LA   R   PIAGG P  TC  C   
Sbjct: 627 FPTYSRGTKSDDQRHRD--HEVKKYLREKHH---LAK--RHLRPIAGGVPLITCPCCLKQ 679

Query: 347 LQVPKKVLFMGKNQQKIRCGACSTVINFAVVNKKLVL 383
           LQ+P   +   +   +++CGACS V+ F++VN+  ++
Sbjct: 680 LQLPADFVLFKRRFHRLKCGACSEVLKFSLVNRTHLI 716


>29676.m001681 GTP-binding  protein alpha subunit, gna, putative
          Length = 917

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)

Query: 638 IHPGKYWYDARAGFWGVIGGPCLGIIPPFIEEFDYPMPEDCAGGNTGVFVNGRELHQKDL 697
           + PG YWYD  +G WG  G     II P +     P+  D + GNT V++NGRE+ + +L
Sbjct: 366 LKPGNYWYDKVSGLWGKEGQKPSQIISPHL-NVGGPINADASNGNTQVYINGREITKVEL 424

Query: 698 DLLTGRGL 705
            +L   G+
Sbjct: 425 RMLQLAGV 432


>29851.m002477 GTP-binding  protein alpha subunit, gna, putative
          Length = 928

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 15/104 (14%)

Query: 638 IHPGKYWYDARAGFWGVIG-GPCLGIIPPFIEEFDYPMPEDCAGGNTGVFVNGRELHQKD 696
           + PG YWYD  +GFWG  G  PC  I P         +  D + GNT + +N RE+ + +
Sbjct: 388 LKPGNYWYDKVSGFWGKEGQKPCQIISPQLT--IGGHIKRDASNGNTNIMINNREITKVE 445

Query: 697 LDLLTGRGLP--------IDRDRSYIVE----ISGRVLDEETGE 728
           L +L   G+         +D D SY  E    + GR+ ++ T +
Sbjct: 446 LLMLQLVGVKCEGTNHFWVDADGSYQEEGMNNVKGRIWEKNTAK 489


>30068.m002662 GTP-binding  protein alpha subunit, gna, putative
          Length = 1203

 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 10/138 (7%)

Query: 596 IKKSFKDFSRSNQDERGRSNVSVNGHIIPDRLVKKAEKLAGPI-----HPGKYWYDARAG 650
           +K+  K     + ++     + VNG   P +  + AE L  P+      PG+YWYD  +G
Sbjct: 261 VKQIMKAEKECSANQLRPEQLIVNG--FPLKPEEMAELLGCPLPPRKLKPGRYWYDKESG 318

Query: 651 FWGVIGGPCLGIIPPFIEEFDYPMPEDCAGGNTGVFVNGRELHQKDLDLLTGRGLPIDRD 710
            WG  G     +I   +  F   +  D + G+T V++NGRE+ + +L +L    +   RD
Sbjct: 319 LWGKEGEKPDRVISSNL-NFTGRLSPDASNGSTEVYINGREITKLELRVLKLANVQCPRD 377

Query: 711 RSYIVEISGRVLDEETGE 728
             + V   GR   EE G+
Sbjct: 378 THFWVYDDGRY--EEEGQ 393


>28613.m000141 GTP-binding  protein alpha subunit, gna, putative
          Length = 846

 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 8/112 (7%)

Query: 618 VNGHIIPDRLVKKAEKLAGP-----IHPGKYWYDARAGFWGVIGGPCLGIIPPFIEEFDY 672
           VNG  +  R  + AE L  P     + PGKYWYD  +G WG  G     II   +     
Sbjct: 273 VNGRSL--RQEELAEVLGCPMPPENLKPGKYWYDKDSGLWGKEGEKPDRIITSKLNVGGK 330

Query: 673 PMPEDCAGGNTGVFVNGRELHQKDLDLLTGRGLPIDRDRSYIVEISGRVLDE 724
             P D + GNT V++NGRE+ + +L +L    +   RD  + V   G   +E
Sbjct: 331 LRP-DASNGNTKVYINGREITKTELRVLKLAKVQCPRDTHFWVYDDGSYEEE 381