Jatropha Genome Database

JcCB0199171.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0199171.10 + phase: 0 
         (159 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27383.m000156 triosephosphate isomerase, putative                     238   7e-64
29711.m000323 triosephosphate isomerase, putative                     179   5e-46
30028.m000254 triosephosphate isomerase, putative                      60   4e-10
32915.m000014 triosephosphate isomerase, putative                      55   1e-08

>27383.m000156 triosephosphate isomerase, putative
          Length = 254

 Score =  238 bits (608), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 113/135 (83%), Positives = 128/135 (94%)

Query: 19  SAEMLVNLNIPWVILGHSERRALLNESNEFVADKVAYALSQGLKVIACIGETLEQRESGS 78
           SAEMLVNL+IPWVILGHSERR LL+ESNEFV DKVAYALSQGLKVIAC+GETLEQRE+GS
Sbjct: 80  SAEMLVNLSIPWVILGHSERRLLLSESNEFVGDKVAYALSQGLKVIACVGETLEQREAGS 139

Query: 79  TVAVVAAQTKAIADKISNWANVVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLSENVSA 138
           T+ VVAAQTKAIA+++ +WA+VVLAYEPVWAIGTGKVATPAQAQEVHFELRKWL EN S+
Sbjct: 140 TMDVVAAQTKAIAERVKDWADVVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLKENTSS 199

Query: 139 EVAASTRIIYGGNFS 153
           +VAA+TRIIYGG+ +
Sbjct: 200 QVAATTRIIYGGSVT 214


>29711.m000323 triosephosphate isomerase, putative
          Length = 313

 Score =  179 bits (454), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 84/133 (63%), Positives = 101/133 (75%)

Query: 19  SAEMLVNLNIPWVILGHSERRALLNESNEFVADKVAYALSQGLKVIACIGETLEQRESGS 78
           S E L ++   WVILGHSERR ++ E++EF+  K AYALSQGL VIACIGE LE+RE+G 
Sbjct: 137 SVEQLNDIGCKWVILGHSERRHVIGENDEFIGKKAAYALSQGLGVIACIGELLEEREAGK 196

Query: 79  TVAVVAAQTKAIADKISNWANVVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLSENVSA 138
           T  V   Q KA AD + +W  +V+AYEPVWAIGTGKVATP QAQEVH  LR WL +N+S 
Sbjct: 197 TFDVCFQQLKAYADAVPSWDKIVIAYEPVWAIGTGKVATPQQAQEVHVALRDWLKKNISE 256

Query: 139 EVAASTRIIYGGN 151
           EVA+ TRIIYGG+
Sbjct: 257 EVASKTRIIYGGS 269


>30028.m000254 triosephosphate isomerase, putative
          Length = 118

 Score = 60.1 bits (144), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/31 (87%), Positives = 30/31 (96%)

Query: 19  SAEMLVNLNIPWVILGHSERRALLNESNEFV 49
           SAEML+NL+IPWVILGHSERRALLNESNE +
Sbjct: 80  SAEMLLNLSIPWVILGHSERRALLNESNELL 110


>32915.m000014 triosephosphate isomerase, putative
          Length = 70

 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/28 (85%), Positives = 27/28 (96%)

Query: 124 VHFELRKWLSENVSAEVAASTRIIYGGN 151
           VHFELRKWL +NVS+EVAASTRIIYGG+
Sbjct: 1   VHFELRKWLHDNVSSEVAASTRIIYGGS 28