Jatropha Genome Database

JcCB0194971.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0194971.10 - phase: 0 /pseudo
         (175 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30015.m000215 alanine-glyoxylate aminotransferase, putative           271   1e-73
28196.m000210 alanine-glyoxylate aminotransferase, putative           186   5e-48
28196.m000208 pentatricopeptide repeat-containing protein, putative    64   3e-11
28196.m000212 pentatricopeptide repeat-containing protein, putative    60   7e-10
30169.m006332 acetylornithine aminotransferase, putative               56   7e-09
29693.m001974 ornithine aminotransferase, putative                     50   7e-07

>30015.m000215 alanine-glyoxylate aminotransferase, putative
          Length = 480

 Score =  271 bits (692), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 126/160 (78%), Positives = 141/160 (88%), Gaps = 3/160 (1%)

Query: 1   MQRFVAKRLLSGRSSLSIHRCF-SQLAQNEAS--VLDNDALIPKMPPFDYSPPPYTGPSS 57
           MQRF+A+R+LS   S    RCF SQLAQ E+S  V +N+  IPKMPPFDYSPPPYTGPS+
Sbjct: 1   MQRFIARRVLSETKSFPSSRCFFSQLAQKESSSSVHENEVFIPKMPPFDYSPPPYTGPSA 60

Query: 58  EEIMTKRKEFLSPSLFHFYKKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPDI 117
            EI+ KRKEFLSPS+FHFY KPLNVVDGKMQYLFDENGRRY+DAFGGIATVCCGHCHP++
Sbjct: 61  AEIIAKRKEFLSPSIFHFYDKPLNVVDGKMQYLFDENGRRYVDAFGGIATVCCGHCHPEV 120

Query: 118 IDSIVNQIKRLQHSTVLYLNHAIADFAEALASKMPGNLKV 157
           +DSIV QI R+QHSTVLYLNHAI+DFAEALASKMPGNLKV
Sbjct: 121 VDSIVKQINRIQHSTVLYLNHAISDFAEALASKMPGNLKV 160


>28196.m000210 alanine-glyoxylate aminotransferase, putative
          Length = 483

 Score =  186 bits (472), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 80/113 (70%), Positives = 100/113 (88%)

Query: 45  FDYSPPPYTGPSSEEIMTKRKEFLSPSLFHFYKKPLNVVDGKMQYLFDENGRRYLDAFGG 104
           F+Y P PY GP ++EI++KRK+FL PSLF++Y+KPLN+V+GKMQYLFDE+GRRYLDAF G
Sbjct: 51  FNYEPKPYKGPLADEILSKRKKFLGPSLFYYYQKPLNIVEGKMQYLFDESGRRYLDAFAG 110

Query: 105 IATVCCGHCHPDIIDSIVNQIKRLQHSTVLYLNHAIADFAEALASKMPGNLKV 157
           I TV CGHCHPD++++I  Q K LQH+T +YL+HAIADFAEALA+KMPGNLKV
Sbjct: 111 IVTVSCGHCHPDVLNAISEQSKLLQHATTIYLHHAIADFAEALAAKMPGNLKV 163


>28196.m000208 pentatricopeptide repeat-containing protein, putative
          Length = 404

 Score = 63.9 bits (154), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 38/50 (76%)

Query: 85  GKMQYLFDENGRRYLDAFGGIATVCCGHCHPDIIDSIVNQIKRLQHSTVL 134
           G   YLFD  G++YLDAF GIATV  GHCHP+++++I+ + K L H+T++
Sbjct: 344 GDATYLFDICGQQYLDAFAGIATVLSGHCHPNVLNAIMKKSKLLHHATII 393


>28196.m000212 pentatricopeptide repeat-containing protein, putative
          Length = 113

 Score = 59.7 bits (143), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 37/50 (74%)

Query: 85  GKMQYLFDENGRRYLDAFGGIATVCCGHCHPDIIDSIVNQIKRLQHSTVL 134
           G   YLFD  G++Y DAF GIATV  GHCHP+++++I+ + K L H+T++
Sbjct: 52  GDATYLFDICGQQYPDAFAGIATVLSGHCHPNVLNAIMKKSKLLHHATII 101


>30169.m006332 acetylornithine aminotransferase, putative
          Length = 470

 Score = 56.2 bits (134), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)

Query: 57  SEEIMTKRKEFLSPSLFHFYKKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPD 116
           S+E+M    +F+  +   + + P+ +  GK   L+D  GR YLD   GIA    GHC PD
Sbjct: 66  SKEVMEAEGKFMVGT---YARAPVVLASGKGCKLYDVEGREYLDMTSGIAVNALGHCDPD 122

Query: 117 IIDSIVNQIKRLQHSTVLY 135
            + ++V+Q   L H + +Y
Sbjct: 123 WVKAVVDQADVLTHVSNVY 141


>29693.m001974 ornithine aminotransferase, putative
          Length = 473

 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 3/101 (2%)

Query: 49  PPPYTGPSSEEIMTKRKEFLSPSLFHFYKKPLNVVDGKMQYLFDENGRRYLDAFGGIATV 108
           P   T  SS++++    +F   S  +++  P+     K   ++D  G +YLD     + V
Sbjct: 27  PEGTTSSSSQQLIGLEYDF---SAHNYHPVPIVFSRAKGSSIWDPEGNKYLDFLSAYSAV 83

Query: 109 CCGHCHPDIIDSIVNQIKRLQHSTVLYLNHAIADFAEALAS 149
             GHCHP I+ ++ +Q ++L  S+  + N     FAE L S
Sbjct: 84  NQGHCHPKIMKALKDQAEKLTLSSRAFYNDRFPLFAERLTS 124