Jatropha Genome Database

JcCB0190821.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0190821.10 - phase: 0 /pseudo
         (236 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m014025 glucose-6-phosphate isomerase, putative                 387   e-108
29908.m006236 glucose-6-phosphate isomerase, putative                  51   5e-07

>30170.m014025 glucose-6-phosphate isomerase, putative
          Length = 568

 Score =  387 bits (994), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 182/207 (87%), Positives = 197/207 (95%)

Query: 1   MASAALICDTHPWKTLKAHVEDIKKTHLRDLMSDSERCKSMVVEFDGIIVDFSRQQATVD 60
           MA +ALICDT PWK LKAHVEDIKKTHLR+L+ D+ERCKSM+VEFDGI++D+SRQ AT+D
Sbjct: 1   MALSALICDTQPWKDLKAHVEDIKKTHLRNLLGDTERCKSMLVEFDGIMLDYSRQTATID 60

Query: 61  TVDKLYNLAEAAHLKEKIHHMFNGERINTTENRSVLHVALRAPRDAVIKSDGKNVVPDVW 120
           T+DKLYNLAEAAHLKEKIH MFNGERIN+TENRSVLHVALRAPRDA++ SDGKNVVPDVW
Sbjct: 61  TLDKLYNLAEAAHLKEKIHRMFNGERINSTENRSVLHVALRAPRDAIVNSDGKNVVPDVW 120

Query: 121 NVLDKIKDFSERLRNGSWVGATGKQLTDVIAIGIGGSFLGPLFVHTALQTDPEASKFAKG 180
           NVLDKIK+FSER+RNGSWVGATGK LTDVIAIGIGGSFLGPLFVHTALQTDPEASK AKG
Sbjct: 121 NVLDKIKEFSERVRNGSWVGATGKPLTDVIAIGIGGSFLGPLFVHTALQTDPEASKSAKG 180

Query: 181 RQLRFLANVDPIDVARNIAGLHPETTL 207
           RQLRFLANVDPIDVARNIAGL PETTL
Sbjct: 181 RQLRFLANVDPIDVARNIAGLSPETTL 207


>29908.m006236 glucose-6-phosphate isomerase, putative
          Length = 618

 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 20/165 (12%)

Query: 47  GIIVDFSRQQATVDTVDKLYNLAEAAHLKEKIHHMFNGERINTTENRSVLHVALRAP--- 103
           G+ +D SR   T + V+++    + A   + +  +  G   N  E R V H  LR P   
Sbjct: 94  GLYLDVSRIGFTDNFVEEMDPRFQKAF--KDMEELEKGAIANPDEGRMVGHYWLRNPGLA 151

Query: 104 RDAVIKSDGKNVVPDVWNVLDKIKDFSERLRNGSWVGATGKQ--LTDVIAIGIGGSFLGP 161
             A +K         +   LD +  F+  + +G        +   T ++++GIGGS LGP
Sbjct: 152 PKAFLKQQ-------IDKALDAVCQFAGDVVSGKIKPPNSPEGRFTQILSVGIGGSALGP 204

Query: 162 LFVHTALQTDPEASKFAKGRQLRFLANVDPIDVARNIAGLHPETT 206
            FV  AL  D    K      +RF+ N DP  +   IA L PE +
Sbjct: 205 QFVAEALAPDNPPLK------IRFIDNTDPAGIDHQIAQLGPELS 243