Jatropha Genome Database

JcCB0190191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0190191.10 + phase: 2 /partial
         (83 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29908.m006089 isoamylase, putative                                    177   6e-46
29776.m000488 isoamylase, putative                                    116   3e-27
28153.m000287 isoamylase, putative                                     92   5e-20

>29908.m006089 isoamylase, putative
          Length = 783

 Score =  177 bits (450), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 75/83 (90%), Positives = 81/83 (97%)

Query: 1   CNHPVVMELILDSLRHWVAEYHVDGFRFDLASILCRGTDGSPLDSPPVIRAIAKDPILSR 60
           CNHPVVMELIL+SLRHWV EYHVDGFRFDLAS+LCRGTDG+PL++PPVIRAIAKD ILSR
Sbjct: 418 CNHPVVMELILESLRHWVTEYHVDGFRFDLASVLCRGTDGTPLNAPPVIRAIAKDAILSR 477

Query: 61  CKIIAEPWDCGGLYLVGKFPNWD 83
           CKII+EPWDCGGLYLVGKFPNWD
Sbjct: 478 CKIISEPWDCGGLYLVGKFPNWD 500


>29776.m000488 isoamylase, putative
          Length = 795

 Score =  116 bits (290), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/101 (53%), Positives = 64/101 (63%), Gaps = 19/101 (18%)

Query: 1   CNHPVVMELILDSLRHWVAEYHVDGFRFDLASILCRG-------------------TDGS 41
           CNHP+V + ILD LR+WV E HVDGFRFDLASI+ RG                   T G+
Sbjct: 395 CNHPIVRQFILDCLRYWVLEMHVDGFRFDLASIMTRGSSLWDAVNVFGNPIEGDLLTTGT 454

Query: 42  PLDSPPVIRAIAKDPILSRCKIIAEPWDCGGLYLVGKFPNW 82
           PL SPP+I  I+ DPIL   K++AE WD GGLY VG FP+W
Sbjct: 455 PLSSPPLIDMISNDPILHGVKLVAEAWDTGGLYQVGSFPHW 495


>28153.m000287 isoamylase, putative
          Length = 872

 Score = 92.0 bits (227), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 40/68 (58%), Positives = 50/68 (73%)

Query: 1   CNHPVVMELILDSLRHWVAEYHVDGFRFDLASILCRGTDGSPLDSPPVIRAIAKDPILSR 60
           CN+P+V  +ILDSL+HWV E+H+DGF F  AS L  G  G  L  PP++ AIA DPILS+
Sbjct: 497 CNYPIVQRMILDSLQHWVTEFHIDGFCFINASALLTGFHGEHLSRPPLVEAIAFDPILSK 556

Query: 61  CKIIAEPW 68
            KIIA+PW
Sbjct: 557 TKIIADPW 564