Jatropha Genome Database
- JcCB0189931.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0189931.10 + phase: 0
(108 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30174.m008934 mads box protein, putative 114 7e-27
30138.m003939 mads box protein, putative 107 1e-24
30147.m014133 mads box protein, putative 96 4e-21
29648.m001978 mads box protein, putative 95 7e-21
29596.m000699 mads box protein, putative 92 6e-20
29908.m005982 mads box protein, putative 91 1e-19
29804.m001536 mads box protein, putative 90 2e-19
29907.m000663 mads box protein, putative 89 3e-19
30170.m013776 mads box protein, putative 88 7e-19
29782.m000119 Floral homeotic protein DEFICIENS, putative 88 9e-19
30221.m002218 mads box protein, putative 86 5e-18
29838.m001690 mads box protein, putative 82 4e-17
30138.m004061 mads box protein, putative 73 3e-14
29693.m002039 mads box protein, putative 67 2e-12
29693.m002042 mads box protein, putative 65 5e-12
30099.m001672 mads box protein, putative 65 5e-12
28348.m000077 mads box protein, putative 65 8e-12
27866.m000233 mads box protein, putative 64 1e-11
29813.m001508 mads box protein, putative 64 1e-11
29693.m002041 mads box protein, putative 64 2e-11
29838.m001672 mads box protein, putative 62 7e-11
29613.m000367 mads box protein, putative 61 1e-10
28830.m000229 mads box protein, putative 59 5e-10
30099.m001671 mads box protein, putative 59 5e-10
29912.m005524 mads box protein, putative 55 7e-09
29739.m003627 mads box protein, putative 54 2e-08
27893.m000228 mads box protein, putative 52 7e-08
30190.m010925 conserved hypothetical protein 52 9e-08
28180.m000391 mads box protein, putative 50 3e-07
29653.m000299 mads box protein, putative 47 2e-06
>30174.m008934 mads box protein, putative
Length = 244
Score = 114 bits (286), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 55/59 (93%), Positives = 58/59 (98%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFSS 59
MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF +
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGN 59
>30138.m003939 mads box protein, putative
Length = 244
Score = 107 bits (268), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/61 (80%), Positives = 58/61 (95%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFSSI 60
MGRGRV+LKRIENKINRQVTF+KRR GLLKKA+E+SVLCDAEVALI+FS +GKL+E+S+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
Query: 61 S 61
S
Sbjct: 61 S 61
>30147.m014133 mads box protein, putative
Length = 213
Score = 95.9 bits (237), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 54/59 (91%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFSS 59
M RG+++++RIEN +RQVTF+KRRNGLLKKAYELSVLCDAEVA+IIFS +G+L EF+S
Sbjct: 1 MVRGKIQMRRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLSEFAS 59
>29648.m001978 mads box protein, putative
Length = 234
Score = 94.7 bits (234), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 55/61 (90%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFSSI 60
MGRGR+E+KRIEN NRQVT++KRRNG++KKA E++VLCDAEV+LIIF++ GK++E+ S
Sbjct: 1 MGRGRIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAEVSLIIFASSGKMHEYCSP 60
Query: 61 S 61
S
Sbjct: 61 S 61
>29596.m000699 mads box protein, putative
Length = 262
Score = 92.0 bits (227), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 54/61 (88%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFSSI 60
MGRG++ ++RI+N +RQVTF+KRRNGLLKKA EL++LCDAEV ++IFS+ GKLY+FSS
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVVIFSSTGKLYDFSSS 60
Query: 61 S 61
S
Sbjct: 61 S 61
>29908.m005982 mads box protein, putative
Length = 347
Score = 90.9 bits (224), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/58 (68%), Positives = 50/58 (86%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFS 58
MGR ++E+KRIEN NRQVTF+KRRNGL+KKAYELS+LCD ++ALI+FS G+L FS
Sbjct: 1 MGRVKLEIKRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSGRLSHFS 58
>29804.m001536 mads box protein, putative
Length = 266
Score = 90.1 bits (222), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 53/61 (86%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFSSI 60
MGRG++ ++RI+N +RQVTF+KRRNGLLKKA ELS+LCDAEV +IIFS+ KLY+++S
Sbjct: 28 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGVIIFSSTSKLYDYAST 87
Query: 61 S 61
S
Sbjct: 88 S 88
>29907.m000663 mads box protein, putative
Length = 205
Score = 89.4 bits (220), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 50/59 (84%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFSS 59
M RG+V++KRIEN ++RQVTF KRR+GLLKKA ELSVLCDAE+ L IFS GKLY+ ++
Sbjct: 1 MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGLFIFSAHGKLYDLAT 59
>30170.m013776 mads box protein, putative
Length = 230
Score = 88.2 bits (217), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 51/60 (85%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFSSI 60
MGR ++++KRIEN NRQVTF+KRRNGL+KKAYELSVLCD +VALI+FS G+L FS I
Sbjct: 1 MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDVDVALIMFSPSGRLSLFSGI 60
>29782.m000119 Floral homeotic protein DEFICIENS, putative
Length = 235
Score = 87.8 bits (216), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRG-KLYEFSS 59
MGRG++E+K+IEN NRQVT++KRRNG+ KKA EL+VLCDA+V+LI+FSN G K +EF S
Sbjct: 1 MGRGKIEIKKIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNSGRKFHEFIS 60
Query: 60 ISKYDXXXXXXXXXXXXVCIWILSMNYM 87
+ +WI M
Sbjct: 61 PGTTTKKIFDQYQKTLGIDLWITHYERM 88
>30221.m002218 mads box protein, putative
Length = 233
Score = 85.5 bits (210), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 49/57 (85%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEF 57
MGRG++ +KRIEN+ RQVTF+KRR GLLKK +ELSVLCDA++ LIIFS+ GK+ ++
Sbjct: 1 MGRGKIPIKRIENQTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKMCQY 57
>29838.m001690 mads box protein, putative
Length = 61
Score = 82.4 bits (202), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 49/59 (83%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFSS 59
M R ++++K+I+N RQVTF+KRR GL KKAYELS LCDAE+AL++FS GKL+E++S
Sbjct: 1 MTRQKIQIKKIDNITARQVTFSKRRRGLFKKAYELSTLCDAEIALLVFSATGKLFEYAS 59
>30138.m004061 mads box protein, putative
Length = 363
Score = 72.8 bits (177), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/53 (58%), Positives = 44/53 (83%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGK 53
MGR ++++KR+E+ NRQVT++KRRNG+LKKA ELS+LCD + L++FS GK
Sbjct: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKAKELSILCDIHIVLLMFSPTGK 53
>29693.m002039 mads box protein, putative
Length = 172
Score = 67.0 bits (162), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 45/61 (73%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFSSI 60
MGR ++E+K +++ +RQVTF+KRR GL KKA EL+ LC A++A+++FS GK + F
Sbjct: 1 MGRRKIEMKMVKDTSSRQVTFSKRRTGLFKKANELATLCAAQIAIVVFSPGGKPFSFGHP 60
Query: 61 S 61
+
Sbjct: 61 T 61
>29693.m002042 mads box protein, putative
Length = 220
Score = 65.5 bits (158), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 43/60 (71%)
Query: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFSSIS 61
GR ++ +KRIEN+ +R +TF+KRR+G+ KKA EL LC AEV +++FS GK + F S
Sbjct: 9 GRQKITMKRIENEEDRLITFSKRRSGIYKKASELITLCGAEVGILVFSPAGKPFSFGHPS 68
>30099.m001672 mads box protein, putative
Length = 217
Score = 65.5 bits (158), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 43/56 (76%)
Query: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEF 57
GR ++++ ++ N+ N QVTF+KRR+GL KKA ELS LC AE+A+I+FS K++ F
Sbjct: 7 GRQKIDMVKMPNESNLQVTFSKRRSGLFKKASELSTLCGAEIAIIVFSPGKKVFSF 62
>28348.m000077 mads box protein, putative
Length = 215
Score = 64.7 bits (156), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 43/54 (79%)
Query: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLY 55
GR ++E+K++EN R VTF+KR++G+ KKA ELS LC AE+A+++FS GK++
Sbjct: 17 GRQKIEIKKLENVNRRYVTFSKRKHGIFKKATELSTLCGAEIAVVLFSGHGKVF 70
>27866.m000233 mads box protein, putative
Length = 217
Score = 64.3 bits (155), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 43/60 (71%)
Query: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFSSIS 61
GR ++E+K IE K N QVTF+KRR GL KKA ELS+LC A+VA++ FS K++ F +
Sbjct: 13 GRQKIEIKPIEGKSNLQVTFSKRRAGLFKKASELSLLCGAQVAVLAFSPGKKVFAFGHPN 72
>29813.m001508 mads box protein, putative
Length = 360
Score = 64.3 bits (155), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 42/53 (79%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGK 53
MGR ++++K++EN RQ T+ KR++G++KKA ELS+LCD ++ L++FS GK
Sbjct: 1 MGRVKLKIKKLENTNGRQATYGKRKHGIIKKAKELSILCDIDIILLMFSPTGK 53
>29693.m002041 mads box protein, putative
Length = 239
Score = 63.5 bits (153), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 44/60 (73%)
Query: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFSSIS 61
GR ++E+K+IEN+ +R +TF+KRR+G+ KKA EL L AE+A +++S GK + F+ S
Sbjct: 12 GRQKIEMKKIENEDDRLITFSKRRSGIYKKASELVTLTGAELAFLVYSPAGKPFSFAHPS 71
>29838.m001672 mads box protein, putative
Length = 207
Score = 61.6 bits (148), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 42/60 (70%)
Query: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFSSIS 61
GR R+E+ +I + NR VTF+KRR G+ KKA ELS LC AE+++I+FS + + F + S
Sbjct: 8 GRQRIEMVKISKESNRLVTFSKRRYGVFKKASELSTLCGAEISIIVFSPGKRAFSFGNPS 67
>29613.m000367 mads box protein, putative
Length = 183
Score = 60.8 bits (146), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEF 57
+GR ++ +++I K + QVTF+KRR GL KKA EL LC E+A+I+FS GK + F
Sbjct: 6 LGRQKIAIEKISKKSHLQVTFSKRRAGLFKKASELCTLCGVEIAIIVFSPAGKAFSF 62
>28830.m000229 mads box protein, putative
Length = 197
Score = 58.9 bits (141), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEF 57
MGR + ++ I+ + RQV+F+KRR G+ KKA EL LC E A++IFS GK + F
Sbjct: 1 MGRKKTQMSLIQGESARQVSFSKRRTGIFKKASELCTLCAVEAAVVIFSPGGKAFTF 57
>30099.m001671 mads box protein, putative
Length = 226
Score = 58.9 bits (141), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEF 57
+GR ++ +++I K + QVTF+KRR GL KKA EL LC E+A+++FS K + F
Sbjct: 26 LGRQKIAIEKISKKTHLQVTFSKRRAGLFKKASELCTLCGVEIAILVFSPANKAFSF 82
>29912.m005524 mads box protein, putative
Length = 338
Score = 55.1 bits (131), Expect = 7e-09, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNR 51
MGRG++ ++ I N+ +R +T+ KR+ GL KK E +LCD + +IIFS +
Sbjct: 1 MGRGKLNMELISNEKSRMITYHKRKKGLTKKVQEFHILCDVDACIIIFSPK 51
>29739.m003627 mads box protein, putative
Length = 62
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGK 53
MGR ++++ R+E+ RQV ++KR+ G+LKK EL+ LCD ++ LI+FS GK
Sbjct: 1 MGRRKLKILRLESVKARQVKYSKRKLGVLKKGKELATLCDVDLGLIMFSPSGK 53
>27893.m000228 mads box protein, putative
Length = 349
Score = 52.0 bits (123), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%), Gaps = 4/54 (7%)
Query: 8 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS----NRGKLYEF 57
+K++E++ R V+F KRRNGL KA EL +LCDA++A+++ S + K+Y F
Sbjct: 9 MKKLESQKQRSVSFTKRRNGLFNKAAELFMLCDAQLAVLVASPCSKPKRKVYSF 62
>30190.m010925 conserved hypothetical protein
Length = 386
Score = 51.6 bits (122), Expect = 9e-08, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGK 53
MG R++++ IE + R +T+ KR+ L+KK E S+LC E LIIF+ + K
Sbjct: 1 MGHSRIKMELIEKESTRMLTYQKRKKSLVKKVSEFSILCGVEACLIIFAPKHK 53
>28180.m000391 mads box protein, putative
Length = 328
Score = 49.7 bits (117), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 5 RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSN-RGKLYEF 57
++ +K+ E K R V+F KRR GL KA EL +LCDA++AL++ S K+Y F
Sbjct: 6 KLPMKKRETKKQRSVSFTKRRYGLFNKAAELFMLCDAQLALLVSSPCSRKVYSF 59
>29653.m000299 mads box protein, putative
Length = 166
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 5 RVELKRI-ENKINRQVTFAKRRNGLLKKAYELSVL--CDAEVALIIFSNRGKLYEFSSIS 61
++E+K+I +NK VTF+KRR GL KKA E L AEVALI FS G+ + F S
Sbjct: 29 KIEIKKIQDNKTGLIVTFSKRRTGLFKKAMEFCNLDGGGAEVALITFSPSGRPFSFGKPS 88