Jatropha Genome Database

JcCB0186651.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0186651.10 - phase: 0 
         (353 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30167.m000856 conserved hypothetical protein                          164   8e-41
29738.m001041 conserved hypothetical protein                          111   5e-25
30174.m008721 conserved hypothetical protein                           94   1e-19
29646.m001101 transcription factor, putative                           80   1e-15
29693.m001968 conserved hypothetical protein                           77   1e-14
29646.m001100 transcription factor, putative                           75   3e-14
30192.m000545 conserved hypothetical protein                           75   6e-14
29905.m000443 transcription factor, putative                           70   2e-12
30138.m003959 transcription factor, putative                           69   5e-12

>30167.m000856 conserved hypothetical protein
          Length = 394

 Score =  164 bits (414), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 129/315 (40%), Positives = 151/315 (47%), Gaps = 90/315 (28%)

Query: 102 VFVSAKKPLKKDRHSKIHTSQGLRDRRVRLSIQIARKFFDLQDMLGFDKASKTLEWLLSK 161
           V +  +KP KK RHSKI T+QGLRDRRVRLSI+IARKFFDLQD+LGFDKASKTLEWLLSK
Sbjct: 85  VLLPVQKPFKKHRHSKICTAQGLRDRRVRLSIEIARKFFDLQDLLGFDKASKTLEWLLSK 144

Query: 162 SKRAIKRVAHKRXXXXXXXXXXXTCEALSPENGEIAMEEGIVS--------TGXXXXXXX 213
           S++AIK +A              TC       GEI   EGIVS        TG       
Sbjct: 145 SRKAIKALAQNAEGAKSLSSSSATCGG-----GEI---EGIVSKKDQSVAATGSCNEKGT 196

Query: 214 XXX-------XYTTNLAAKELRVKARARARERTRIK--------------MLNQYLLS-- 250
                        +NL AKE R KAR RARERTR+K              MLNQ   S  
Sbjct: 197 KKMRIAAASTAAASNLVAKESRAKARERARERTRVKMCTRKSHESKNYTDMLNQSRSSLL 256

Query: 251 ---------------------------NDELVDELPDAKXXXXXXXXXXX--------XR 275
                                      +D  V+ELP                       R
Sbjct: 257 NQQHHHHQQACEKLSGCNDSVKVVAHHHDHQVEELPANNSNLSSSLAKGNIIEESILIKR 316

Query: 276 KLKPSSV----------MGYQQNLLMLRDLTCXXXXXXXXXXXXXXXXWEINNAIARSSF 325
           KLKPS++          MGYQQN++M +D++C                W+IN+AIARSSF
Sbjct: 317 KLKPSTILGYQQKQSTTMGYQQNVVMFKDISC------SNNLPNLPQNWDINSAIARSSF 370

Query: 326 CAITNMNRSAGNYNY 340
           CAITNMNR AG + Y
Sbjct: 371 CAITNMNRPAGLHLY 385


>29738.m001041 conserved hypothetical protein
          Length = 449

 Score =  111 bits (278), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/163 (42%), Positives = 89/163 (54%), Gaps = 26/163 (15%)

Query: 104 VSAKKPLKKDRHSKIHTSQGLRDRRVRLSIQIARKFFDLQDMLGFDKASKTLEWLLSKSK 163
           +S K+  KKDRHSKI+T+QG RDRR+RLS+QIARKFFDLQDMLGFDKASKT++WL +KSK
Sbjct: 119 ISRKRSGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIDWLFTKSK 178

Query: 164 RAIKRVAHK---------------RXXXXXXXXXXXTCEALSPENGEIAMEEGIVSTGXX 208
            AIK +                                +  + +NG+   + G+ + G  
Sbjct: 179 AAIKELTDSYPKVKRSSDSDGSSRSVSSTSESEVMSGTKLTTEDNGD---KRGMGTEGDS 235

Query: 209 --------XXXXXXXXXYTTNLAAKELRVKARARARERTRIKM 243
                               NL A+E R KARARARERT+ K+
Sbjct: 236 FVRQQRCKESNNNKPNKPVFNLLARESRDKARARARERTKEKL 278


>30174.m008721 conserved hypothetical protein
          Length = 315

 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 88/171 (51%), Gaps = 17/171 (9%)

Query: 107 KKPLKKDRHSKIHTSQGLRDRRVRLSIQIARKFFDLQDMLGFDKASKTLEWLLSKSKRAI 166
           K+  K+DRHSKI T+QG RDRR+RLS+++AR+FFDLQD L FDKASKT+EWLL +S+ AI
Sbjct: 37  KRSSKRDRHSKIDTAQGPRDRRMRLSLKVAREFFDLQDKLCFDKASKTVEWLLIQSRPAI 96

Query: 167 KRVAHK-------RXXXXXXXXXXXTCEALSP-ENGEIAMEEG---------IVSTGXXX 209
           +++                       CE +S  +   +A  EG          +S     
Sbjct: 97  RKLFSTGLPSYSCSVGVAKSASSTSECEDVSGIDEAAVANIEGSKNSKGKKPSLSCVNKK 156

Query: 210 XXXXXXXXYTTNLAAKELRVKARARARERTRIKMLNQYLLSNDELVDELPD 260
                      +  AKE R KARARAR+RT  K   + ++    L  E  D
Sbjct: 157 KRPKASRKTAFHPLAKESREKARARARQRTEEKKRTRRIIDVPNLCQEAKD 207


>29646.m001101 transcription factor, putative
          Length = 349

 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 49/60 (81%)

Query: 111 KKDRHSKIHTSQGLRDRRVRLSIQIARKFFDLQDMLGFDKASKTLEWLLSKSKRAIKRVA 170
           +KDRHSK++T++G RDRRVRLS   A +F+D+QD LG+D+ SK ++WL+ K+K AI ++A
Sbjct: 22  RKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLA 81


>29693.m001968 conserved hypothetical protein
          Length = 497

 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 34/65 (52%), Positives = 47/65 (72%)

Query: 106 AKKPLKKDRHSKIHTSQGLRDRRVRLSIQIARKFFDLQDMLGFDKASKTLEWLLSKSKRA 165
           A+    KDRHSK+ TS+GLRDRRVRLS+  A +F+DLQD LG+D+ SK +EWL+  +  +
Sbjct: 86  ARASGGKDRHSKVWTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAAADS 145

Query: 166 IKRVA 170
           I  + 
Sbjct: 146 INELP 150


>29646.m001100 transcription factor, putative
          Length = 409

 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 32/59 (54%), Positives = 46/59 (77%)

Query: 111 KKDRHSKIHTSQGLRDRRVRLSIQIARKFFDLQDMLGFDKASKTLEWLLSKSKRAIKRV 169
           +KDRHSK+ T++G RDRRVRLS   A  F+D+QD LG+D+ SK ++WL+ K+K AI ++
Sbjct: 97  RKDRHSKVCTAKGPRDRRVRLSAHTAIDFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKL 155


>30192.m000545 conserved hypothetical protein
          Length = 595

 Score = 74.7 bits (182), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 45/56 (80%)

Query: 111 KKDRHSKIHTSQGLRDRRVRLSIQIARKFFDLQDMLGFDKASKTLEWLLSKSKRAI 166
           +KDRHSK+ T++G RDRRVRLS   A +F+D+QD LG+D+ SK ++WL+ K+K AI
Sbjct: 216 RKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAI 271


>29905.m000443 transcription factor, putative
          Length = 377

 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/55 (56%), Positives = 42/55 (76%)

Query: 112 KDRHSKIHTSQGLRDRRVRLSIQIARKFFDLQDMLGFDKASKTLEWLLSKSKRAI 166
           KDRHSK+ T +GLRDRRVRLS+  A + +DLQD LG ++ SK ++WLL+ +K  I
Sbjct: 54  KDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDKLGLNQPSKVVDWLLNAAKHEI 108


>30138.m003959 transcription factor, putative
          Length = 371

 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 42/59 (71%)

Query: 112 KDRHSKIHTSQGLRDRRVRLSIQIARKFFDLQDMLGFDKASKTLEWLLSKSKRAIKRVA 170
           KDRHSK+ T +GLRDRR+RLS+  A + +DLQD LG  + SK ++WLL  +K  I ++ 
Sbjct: 53  KDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLDATKDDIDKLP 111