Jatropha Genome Database

JcCB0186451.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0186451.10 - phase: 0 
         (301 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27613.m000624 carboxy-lyase, putative                                 513   e-146
29852.m002037 conserved hypothetical protein                           73   1e-13
30765.m000031 conserved hypothetical protein                           65   5e-11
30170.m014168 carboxy-lyase, putative                                  48   6e-06

>27613.m000624 carboxy-lyase, putative
          Length = 302

 Score =  513 bits (1321), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 246/301 (81%), Positives = 268/301 (89%), Gaps = 1/301 (0%)

Query: 1   MGFPLVLSWGSHIMARSFCDYSIKLRSFNENERFG-GVKVRSSNFKPSTRRISLCKNKLV 59
           MGFPLV S GSH++ R+  + +IKL+SF+EN RFG    +R S  KP  +RISLCK++LV
Sbjct: 1   MGFPLVGSLGSHVLVRNLYEKNIKLQSFDENGRFGVNFSLRCSKSKPFPKRISLCKSELV 60

Query: 60  DFDERTSPNEVRREIERCYNLIQRLGRGVVYLGSSRMGPDHPHYLQVLELGREVAKLLDC 119
           DF+ERTSPNE+R+EIERCY LI RLGRGVVYLGSSRMGPDHPHYLQ LEL REVAKLLDC
Sbjct: 61  DFEERTSPNEIRKEIERCYELIHRLGRGVVYLGSSRMGPDHPHYLQALELSREVAKLLDC 120

Query: 120 TSWTGAGPGLMDAAIKGALEAGKPVGGFKIAKEAGEWTASNFHAYLPSETYLTCRFFSAR 179
           TSW GAGPGLMDA IKGAL+AGKPVGGFKIAKEAGEWTASNFH YLPSETYLTCRFFSAR
Sbjct: 121 TSWMGAGPGLMDATIKGALQAGKPVGGFKIAKEAGEWTASNFHPYLPSETYLTCRFFSAR 180

Query: 180 KHGLVDAAVRNNSSDKTAVVALPGGIGTLDEMFEILALIQLERIGSELPVPFIVMNYDSF 239
           KHGLVDAAVRN  SD+TAVVALPGGIGTLDEMFEILALIQLERIGS LPVPFIVMNYDSF
Sbjct: 181 KHGLVDAAVRNTRSDRTAVVALPGGIGTLDEMFEILALIQLERIGSALPVPFIVMNYDSF 240

Query: 240 YQKLLDFIQNCEDWGTVSRGEVASLWKVCNNNSDALAYLTDFYNIHSSSDEDRHDKKLTT 299
           YQKLLDFIQNCEDWGTVS+GEV  LWK+CN+NS+ALAYLTDFYN+HSSSDE  H K  T+
Sbjct: 241 YQKLLDFIQNCEDWGTVSKGEVTPLWKICNSNSEALAYLTDFYNLHSSSDEYGHGKMPTS 300

Query: 300 A 300
           A
Sbjct: 301 A 301


>29852.m002037 conserved hypothetical protein
          Length = 61

 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 8/68 (11%)

Query: 233 VMNYDSFYQKLLDFIQNCEDWGTVSRGEVASLWKVCNNNSDALAYLTDFYNIHSSSDEDR 292
           +MNYDSF    +        WGTVS+G+V  L K+CN++ +ALA LTDFYN+HSSS+EDR
Sbjct: 1   MMNYDSFLTVGI--------WGTVSKGQVTPLRKICNSSFEALACLTDFYNLHSSSNEDR 52

Query: 293 HDKKLTTA 300
           H +K T++
Sbjct: 53  HGRKTTSS 60


>30765.m000031 conserved hypothetical protein
          Length = 412

 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 76/172 (44%), Gaps = 18/172 (10%)

Query: 118 DCTSWTGAGPGLMDAAIKGALEAGKPVGGFKIAKEAGEWTASNFHAYLPSETYLTCRFFS 177
           + T  TG GPG+M+AA +GA E G    G  I            + Y+  E      +F+
Sbjct: 95  EMTIVTGGGPGIMEAANRGAYECGGRSIGLNIILP----MEQQPNPYITPELCFQFHYFA 150

Query: 178 ARKHGLVDAAVRNNSSDKTAVVALPGGIGTLDEMFEILALIQLERIGSELPVPFIVMNYD 237
            RK   +        +   A+VA PGG GTLDE+FE L LIQ    G    VP ++   D
Sbjct: 151 LRKMHFL--------TRSKALVAFPGGYGTLDELFEALTLIQ---TGKARRVPVLLYGSD 199

Query: 238 SFYQKLLDFIQNCEDWGTVSRGEVASLWKVCNNNSDALAYLTDFYNIHSSSD 289
            F++KL+++    E   T    E   L+   +    A   + DFY +    D
Sbjct: 200 -FWRKLVNWDYLLEM--TCINPEDLDLFHFVDTPQQAWRKIVDFYQLPDEDD 248


>30170.m014168 carboxy-lyase, putative
          Length = 224

 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 76/176 (43%), Gaps = 20/176 (11%)

Query: 83  RLGRGVVYLGSSRMGPDHPHYLQVLELGRE-VAKLLDCTSWTGAGPGLMDAAIKGALEAG 141
           R  R  V+ GSS  G +  + L  ++LG + V K +D   + G   GLM    +   + G
Sbjct: 16  RFSRVCVFCGSSP-GKNPSYQLAAIQLGHQLVEKNIDLV-YGGGSIGLMGLVSQAVYDGG 73

Query: 142 KPVGGFKIAKEAGEWTASNFHAYLPSETYLTCRFFSARKHGLVDAAVRNNSSDKTAVVAL 201
           + V G  I K       +     +  ET    R  S       + A + +     A +AL
Sbjct: 74  RHVLGV-IPK-------TLMPREITGETVGEVRAVSGMHQRKAEMARQAD-----AFIAL 120

Query: 202 PGGIGTLDEMFEILALIQLERIGSELPVPFIVMNYDSFYQKLLDFIQNCEDWGTVS 257
           PGG GTL+E+ E++   QL         P  ++N D +Y  LL FI    D G V+
Sbjct: 121 PGGYGTLEELLEVITWAQLGIHDK----PVGLLNVDGYYNSLLSFIDKAVDEGFVT 172