Jatropha Genome Database

JcCB0181921.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0181921.10 - phase: 0 /pseudo
         (110 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28725.m000311 phospholipase d beta, putative                          127   1e-30
30170.m014290 phospholipase d delta, putative                          66   4e-12
29784.m000369 phospholipase d delta, putative                          59   6e-10
30174.m008942 phospholipase d beta, putative                           49   4e-07

>28725.m000311 phospholipase d beta, putative
          Length = 856

 Score =  127 bits (318), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/88 (64%), Positives = 70/88 (79%), Gaps = 2/88 (2%)

Query: 15  GATTSVEPSFLHGELDLWIIEAKSLPNMDLPAEHIRRCFTVFGSCSDPCGQKGVKHSGKN 74
           G   S EP+ LHGELD+WIIEAKSLPNMDLPAEH+RRCFTVFGSC++PCG++ +KHSG+N
Sbjct: 15  GVAASNEPTTLHGELDVWIIEAKSLPNMDLPAEHMRRCFTVFGSCTNPCGKRHIKHSGRN 74

Query: 75  SMITSDPYC-ICLPCRSNGSTN-*SNCQ 100
            MITSDPY  +CL   +   T   +NC+
Sbjct: 75  KMITSDPYVSVCLAGATVAQTRVITNCE 102


>30170.m014290 phospholipase d delta, putative
          Length = 847

 Score = 65.9 bits (159), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 2/64 (3%)

Query: 24 FLHGELDLWIIEAKSLPNMDLPAEHIRRCFTVFGSCSDPCGQKGVKHSGKNSMITSDPYC 83
          +L+G+LDL IIEA+ LPNMD+  E +RRC   F  C  PC  K  K   +  +ITSDPY 
Sbjct: 13 YLYGDLDLKIIEARQLPNMDIVTERVRRCLLAFDGCRKPC-IKEHKSERQRRIITSDPYV 71

Query: 84 -ICL 86
           +CL
Sbjct: 72 TVCL 75


>29784.m000369 phospholipase d delta, putative
          Length = 857

 Score = 58.5 bits (140), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 13/74 (17%)

Query: 21 EPSFLHGELDLWIIEAKSLPNMDLPAEHIRRCFTVF------------GSCSDPCGQKGV 68
          +P  LHG+LDL+IIEA+SLPNMDL +  IR CF+              G+ +D   +   
Sbjct: 11 QPIILHGDLDLYIIEARSLPNMDLVSTRIRGCFSACNCTKKSTSAASGGASTDEENEDQK 70

Query: 69 KHSGKNSMITSDPY 82
           H  +N +ITSDPY
Sbjct: 71 LHHHRN-IITSDPY 83


>30174.m008942 phospholipase d beta, putative
          Length = 1114

 Score = 49.3 bits (116), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 7/80 (8%)

Query: 5   SPNSQITPYTGATTSVEPSFLHGELDLWIIEAKSLPNMDLPAEHIRRCFTVFGSCSDPCG 64
           S ++QI P+     S+    LHG LD++I EAK+LPNMD+  + +   F          G
Sbjct: 281 SQSTQIVPWQNTKGSLRVLLLHGNLDIYIYEAKNLPNMDMFHKTLGDMFNRL------PG 334

Query: 65  QKGVKHSGKNSM-ITSDPYC 83
             G K  G+ S  ITSDPY 
Sbjct: 335 NIGSKIEGQMSRKITSDPYV 354