Jatropha Genome Database

JcCB0181751.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0181751.10 + phase: 0 /partial
         (217 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30146.m003510 malic enzyme, putative                                  382   e-107
29912.m005447 malic enzyme, putative                                  286   4e-78
29794.m003406 malic enzyme, putative                                  262   7e-71
29709.m001210 malic enzyme, putative                                  107   5e-24
30174.m008988 malic enzyme, putative                                  100   9e-22

>30146.m003510 malic enzyme, putative
          Length = 641

 Score =  382 bits (980), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 186/220 (84%), Positives = 203/220 (92%), Gaps = 6/220 (2%)

Query: 1   MVCVKQSNTSISGSCS-PFSGKQKG--LVPTAPSTLKVVALNPNRDRNGSVVMESSLQEI 57
           M+ +K  N+ +SGSCS P  GKQ+   +VPTAPS+LKVVALNPNR+RNGS++MES+LQE+
Sbjct: 1   MISLK--NSFLSGSCSSPVPGKQRAGLVVPTAPSSLKVVALNPNRERNGSIMMESTLQEM 58

Query: 58  RDGASVLDFDSDKATVTGGVRDVYGEDTATEDQLVTPWSLSVASGYSLLRDPHHNKGLAF 117
           RDGASVLD D  K+TV GGVRDVYGEDTATEDQ VTPWSLSVASGYSLLRDPHHNKGLAF
Sbjct: 59  RDGASVLDLDP-KSTVAGGVRDVYGEDTATEDQFVTPWSLSVASGYSLLRDPHHNKGLAF 117

Query: 118 NDKERNAHYLRGLLPPAVVSQELQVKKMMHIIRQYQFPLQKYMAMMDLQERNEKLFYKLL 177
           NDKER+AHYLRGLLPPA+VSQELQVKKMMHIIRQYQ PLQKYMAMMDLQERNEKLFYKLL
Sbjct: 118 NDKERDAHYLRGLLPPAIVSQELQVKKMMHIIRQYQLPLQKYMAMMDLQERNEKLFYKLL 177

Query: 178 IEHVEEMLPIVYTPTVGEACQKYGSIFGRPQGLYISLNEK 217
           I++VEEMLPIVYTPTVGEACQKYGSIFGRPQGLYISL EK
Sbjct: 178 IQNVEEMLPIVYTPTVGEACQKYGSIFGRPQGLYISLKEK 217


>29912.m005447 malic enzyme, putative
          Length = 591

 Score =  286 bits (732), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 134/168 (79%), Positives = 152/168 (90%), Gaps = 1/168 (0%)

Query: 50  MESSLQEIRDGASVLDFDSDKATVTGGVRDVYGEDTATEDQLVTPWSLSVASGYSLLRDP 109
           MES+++E+R GASVLD D  K+TV GGV DVYGED ATEDQLVTPW+ SVASGYSLLRDP
Sbjct: 1   MESTMKEMRGGASVLDMDP-KSTVGGGVEDVYGEDCATEDQLVTPWTTSVASGYSLLRDP 59

Query: 110 HHNKGLAFNDKERNAHYLRGLLPPAVVSQELQVKKMMHIIRQYQFPLQKYMAMMDLQERN 169
            HNKGLAF++KER+AHYLRGLLPP V +Q+LQ KK+MH IRQYQ PLQKYMAMM+L+ERN
Sbjct: 60  RHNKGLAFSEKERDAHYLRGLLPPVVATQQLQEKKLMHTIRQYQLPLQKYMAMMELEERN 119

Query: 170 EKLFYKLLIEHVEEMLPIVYTPTVGEACQKYGSIFGRPQGLYISLNEK 217
           E+LFYKLLI++VEE+LPIVYTPTVGEACQKYGSIF RPQGLYISL EK
Sbjct: 120 ERLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIFKRPQGLYISLKEK 167


>29794.m003406 malic enzyme, putative
          Length = 588

 Score =  262 bits (670), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 123/168 (73%), Positives = 145/168 (86%), Gaps = 4/168 (2%)

Query: 50  MESSLQEIRDGASVLDFDSDKATVTGGVRDVYGEDTATEDQLVTPWSLSVASGYSLLRDP 109
           MES++  +  G S+L+       V GGV DVYGED ATEDQL+TPW+ S+ASGY+LLRDP
Sbjct: 1   MESTM--MNGGDSLLE--KKNVAVGGGVEDVYGEDFATEDQLITPWAASIASGYTLLRDP 56

Query: 110 HHNKGLAFNDKERNAHYLRGLLPPAVVSQELQVKKMMHIIRQYQFPLQKYMAMMDLQERN 169
            HNKGLAFN+KER+AHYLRGLLPPA++SQE Q K++MH +RQYQ PLQ+YMAMMDLQERN
Sbjct: 57  RHNKGLAFNEKERDAHYLRGLLPPAILSQEHQEKRLMHNLRQYQVPLQRYMAMMDLQERN 116

Query: 170 EKLFYKLLIEHVEEMLPIVYTPTVGEACQKYGSIFGRPQGLYISLNEK 217
           E+LFYKLLI++VEE+LP+VYTPTVGEACQKYGSIF RPQGLYISL EK
Sbjct: 117 ERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEK 164


>29709.m001210 malic enzyme, putative
          Length = 626

 Score =  107 bits (267), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 76/123 (61%), Gaps = 10/123 (8%)

Query: 105 LLRDPHHNKGLAFNDKERNAHYLRGLLPPAVVSQELQVKKMMHIIRQYQF---------- 154
           +L DP  NKG AF+  ER+   LRGLLPP ++S E Q+++ M  +++ +           
Sbjct: 52  ILHDPWFNKGTAFSMTERDRLDLRGLLPPNIMSSEQQIERFMADLKRLEVHARDGPSDPN 111

Query: 155 PLQKYMAMMDLQERNEKLFYKLLIEHVEEMLPIVYTPTVGEACQKYGSIFGRPQGLYISL 214
            L K+  +  L +RNE ++YK+LI ++EE  PIVYTPTVG  CQ Y  +F RP+G+Y S 
Sbjct: 112 ALAKWRILNRLHDRNETMYYKVLIANIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSA 171

Query: 215 NEK 217
            ++
Sbjct: 172 ADR 174


>30174.m008988 malic enzyme, putative
          Length = 602

 Score = 99.8 bits (247), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 50/126 (39%), Positives = 71/126 (56%), Gaps = 10/126 (7%)

Query: 102 GYSLLRDPHHNKGLAFNDKERNAHYLRGLLPPAVVSQELQVKKMMHIIRQYQ-------- 153
           G  +L DP  NK   F   ER+   LRGLLPP V+S E Q  + M   R  +        
Sbjct: 31  GADILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEHQYDRFMESYRSLEKNTQGQPD 90

Query: 154 --FPLQKYMAMMDLQERNEKLFYKLLIEHVEEMLPIVYTPTVGEACQKYGSIFGRPQGLY 211
               L K+  +  L +RNE L+Y++LI+++++  PI+YTPTVG  CQ Y  +F RP+G+Y
Sbjct: 91  SVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMY 150

Query: 212 ISLNEK 217
            S  +K
Sbjct: 151 FSAKDK 156