Jatropha Genome Database
- JcCB0181311.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0181311.10 + phase: 0 /partial
(150 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29948.m000687 similarity to receptor protein kinase, putative 130 3e-31
29842.m003541 similarity to receptor protein kinase, putative 94 3e-20
29912.m005515 ATP binding protein, putative 50 5e-07
29747.m001099 wall-associated kinase, putative 49 8e-07
27504.m000627 serine-threonine protein kinase, plant-type, putative 48 2e-06
29933.m001464 conserved hypothetical protein 47 2e-06
30205.m001621 wall-associated kinase, putative 47 2e-06
30066.m000740 wall-associated kinase, putative 47 3e-06
28327.m000353 ATP binding protein, putative 47 3e-06
29841.m002875 ATP binding protein, putative 47 4e-06
29851.m002386 Serine/threonine-protein kinase PBS1, putative 47 5e-06
29933.m001462 conserved hypothetical protein 45 9e-06
>29948.m000687 similarity to receptor protein kinase, putative
Length = 603
Score = 130 bits (326), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/65 (96%), Positives = 64/65 (98%)
Query: 86 PGSNSDKPVESTGLAPSPGLTGITVDKSVEFSYEELAQATDNFNLANKIGQGGFGSVYYA 145
PGSNSDKPVESTGLAPSPGLTGITVDKSVEFSYEELA ATDNF+LANKIGQGGFGSVYYA
Sbjct: 263 PGSNSDKPVESTGLAPSPGLTGITVDKSVEFSYEELALATDNFSLANKIGQGGFGSVYYA 322
Query: 146 ELRGE 150
ELRGE
Sbjct: 323 ELRGE 327
>29842.m003541 similarity to receptor protein kinase, putative
Length = 607
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 52/64 (81%)
Query: 87 GSNSDKPVESTGLAPSPGLTGITVDKSVEFSYEELAQATDNFNLANKIGQGGFGSVYYAE 146
GS+ DK E T + GLTG TVDKSVEFSYEELA AT++F++ NKIGQGGFGSVYYAE
Sbjct: 268 GSSLDKTSEETTFVATLGLTGFTVDKSVEFSYEELANATNDFSMVNKIGQGGFGSVYYAE 327
Query: 147 LRGE 150
LRGE
Sbjct: 328 LRGE 331
>29912.m005515 ATP binding protein, putative
Length = 670
Score = 49.7 bits (117), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/43 (60%), Positives = 33/43 (76%), Gaps = 2/43 (4%)
Query: 101 PSPGLTGITVDKSVEFSYEELAQATDNFNLANKIGQGGFGSVY 143
PSPGL ++ KS FS+EELA+ATD F+ AN +GQGGFG V+
Sbjct: 276 PSPGL-ALSFSKST-FSFEELARATDGFSNANLLGQGGFGYVH 316
>29747.m001099 wall-associated kinase, putative
Length = 694
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 28/33 (84%)
Query: 116 FSYEELAQATDNFNLANKIGQGGFGSVYYAELR 148
F+Y EL QAT+NF+ A ++G+GGFG+VYY +LR
Sbjct: 356 FTYAELEQATNNFDSAKELGEGGFGTVYYGKLR 388
>27504.m000627 serine-threonine protein kinase, plant-type, putative
Length = 623
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 106 TGITVDKSVEFSYEELAQATDNFNLANKIGQGGFGSVYYAELRGE 150
T +K V +S EE+ +AT+NF+ + KIG GG+GSVY+ EL G+
Sbjct: 297 TAFESEKPVIYSPEEIEEATNNFDESRKIGAGGYGSVYFGELAGQ 341
>29933.m001464 conserved hypothetical protein
Length = 436
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 116 FSYEELAQATDNFNLANKIGQGGFGSVYYAELR 148
++E + ATDNFN+ANK+GQGGFGS+Y L+
Sbjct: 383 LAFESILVATDNFNIANKLGQGGFGSIYKGTLK 415
>30205.m001621 wall-associated kinase, putative
Length = 685
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 116 FSYEELAQATDNFNLANKIGQGGFGSVYYAEL 147
FSYEEL +ATDNF+ + ++G GGFG+VYY L
Sbjct: 345 FSYEELVEATDNFDPSKELGDGGFGTVYYGIL 376
>30066.m000740 wall-associated kinase, putative
Length = 673
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 88 SNSDKPVESTGLAPSPGLTGITVDKSVEFSYEELAQATDNFNLANKIGQGGFGSVYYAEL 147
+NS P + L G++V FSY EL +AT NF+ ++G GGFG+VYY +L
Sbjct: 298 TNSFSPSSRSDLEGGSVYFGVSV-----FSYAELEKATSNFDSKKELGDGGFGTVYYGKL 352
Query: 148 R 148
+
Sbjct: 353 K 353
>28327.m000353 ATP binding protein, putative
Length = 392
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 25/28 (89%)
Query: 116 FSYEELAQATDNFNLANKIGQGGFGSVY 143
FSY EL AT++F+L+NKIG+GGFGSVY
Sbjct: 61 FSYRELKVATNSFHLSNKIGEGGFGSVY 88
>29841.m002875 ATP binding protein, putative
Length = 365
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 116 FSYEELAQATDNFNLANKIGQGGFGSVYYAEL 147
FS +EL AT+NFN NK+G+GGFGSVY+ +L
Sbjct: 28 FSLKELHSATNNFNYDNKLGEGGFGSVYWGQL 59
>29851.m002386 Serine/threonine-protein kinase PBS1, putative
Length = 367
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 115 EFSYEELAQATDNFNLANKIGQGGFGSVYYAELR 148
FSY +L AT+NF+L NKIG+GGFG VY L+
Sbjct: 29 HFSYNQLRSATNNFHLTNKIGRGGFGIVYKGTLK 62
>29933.m001462 conserved hypothetical protein
Length = 1093
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 25/32 (78%)
Query: 116 FSYEELAQATDNFNLANKIGQGGFGSVYYAEL 147
FS +ELA AT+NF++ NK+GQGGFG VY +
Sbjct: 15 FSLQELATATNNFDIVNKLGQGGFGPVYKGDF 46