Jatropha Genome Database

JcCB0176391.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0176391.10 - phase: 0 /partial
         (348 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m009045 Agmatine deiminase, putative                            632   0.0  

>30174.m009045 Agmatine deiminase, putative
          Length = 377

 Score =  632 bits (1630), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 299/347 (86%), Positives = 316/347 (91%)

Query: 1   ERPDNWRDNAVHAQHVFAKVATAISKFEPVTVCASASQWEKARSLLPEHIRVVEMSMNDS 60
           ERPDNWR++AVHAQ  F KVATAISKFEPVTVCAS  QWE AR  LPEHI V+EMSMND+
Sbjct: 31  ERPDNWRNSAVHAQQAFVKVATAISKFEPVTVCASTGQWENARRQLPEHITVIEMSMNDA 90

Query: 61  WFRDTGPTFVVNASNSSSPGQKVAGIDWKFNSWGGVDDGCYQDWSLDLLVARKILQIEKL 120
           WFRDTGPTFVVNASN+ S  QKVAGIDW FNSWGGVDDGCYQDWSLDLLVARKIL I+K+
Sbjct: 91  WFRDTGPTFVVNASNAGSVEQKVAGIDWNFNSWGGVDDGCYQDWSLDLLVARKILGIQKV 150

Query: 121 PRFPHFMILEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKEQIENQLKEYLGVQKVIWLP 180
           PRFPH M+LEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKEQIEN+LK YLGVQKVIWLP
Sbjct: 151 PRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKEQIENELKVYLGVQKVIWLP 210

Query: 181 RGLYGDDDTNGHIDNMCCFVRPGVVLLSWVDDKKDPQFARSTEALFVLSNTTDAKGRKLQ 240
           RGLYGDDDTNGHIDNMCCF +PGVVLLSW DD+KDPQF RS EAL +LSN TDA+GRK Q
Sbjct: 211 RGLYGDDDTNGHIDNMCCFAKPGVVLLSWTDDEKDPQFERSMEALSILSNATDAEGRKFQ 270

Query: 241 IIKIHVPGPLYMTDEEAAGVIQDGEAKPRLPGTRLAASYVNFYIANGGIITPQFGDQERD 300
           IIK+HVPGPLYMT+EEAAGVIQD EAKPRLPGTRLAASYVNFYIANGGIITPQFGDQ+ D
Sbjct: 271 IIKLHVPGPLYMTEEEAAGVIQDNEAKPRLPGTRLAASYVNFYIANGGIITPQFGDQKWD 330

Query: 301 DEAVRVLSQAFPNHEVVRIEGAREIVLGGGNIHCITQQQPAAAPSNL 347
           DEAVRVLSQAFPNHEVVRIE AREIVL GGN HCITQQQPA  PS +
Sbjct: 331 DEAVRVLSQAFPNHEVVRIECAREIVLAGGNFHCITQQQPAVPPSKI 377