Jatropha Genome Database

JcCB0176301.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0176301.20 + phase: 0 
         (136 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29805.m001490 ccaat-binding transcription factor subunit A, puta...   205   6e-54
29923.m000817 ccaat-binding transcription factor subunit A, puta...   191   8e-50
27699.m000212 ccaat-binding transcription factor subunit A, puta...   178   6e-46
29629.m001382 ccaat-binding transcription factor subunit A, puta...   176   4e-45
29966.m000228 ccaat-binding transcription factor subunit A, puta...   174   1e-44
29719.m000316 ccaat-binding transcription factor subunit A, puta...   172   3e-44
29992.m001420 ccaat-binding transcription factor subunit A, puta...   167   2e-42
29726.m004023 ccaat-binding transcription factor subunit A, puta...   146   3e-36
29629.m001369 ccaat-binding transcription factor subunit A, puta...   145   6e-36
57991.m000014 ccaat-binding transcription factor subunit A, puta...   144   1e-35
30128.m008801 ccaat-binding transcription factor subunit A, puta...   130   1e-31
30129.m000351 ccaat-binding transcription factor subunit A, puta...   104   2e-23
30174.m008742 TATA-binding protein-associated phosphoprotein, pu...    72   1e-13
30055.m001567 DNA polymerase epsilon P17 subunit, putative             47   3e-06

>29805.m001490 ccaat-binding transcription factor subunit A,
           putative
          Length = 180

 Score =  205 bits (521), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 95/98 (96%), Positives = 97/98 (98%)

Query: 23  RSNSNFREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQ 82
           RSNSN REQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQ
Sbjct: 27  RSNSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQ 86

Query: 83  REKRKTINGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
           REKRKTINGDDLLWAMATLGFEDYIDPLKIYL+RYRE+
Sbjct: 87  REKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREM 124


>29923.m000817 ccaat-binding transcription factor subunit A,
           putative
          Length = 174

 Score =  191 bits (486), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 87/96 (90%), Positives = 94/96 (97%)

Query: 25  NSNFREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQRE 84
           +S  REQDRYLPIANISRIMKKALPANGKIAKDAK+TVQECVSEFISFITSEASDKCQ+E
Sbjct: 22  HSGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKE 81

Query: 85  KRKTINGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
           KRKTINGDDLLWAMATLGFEDYI+PLK+YL+RYRE+
Sbjct: 82  KRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREM 117


>27699.m000212 ccaat-binding transcription factor subunit A,
           putative
          Length = 182

 Score =  178 bits (452), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 80/92 (86%), Positives = 88/92 (95%)

Query: 29  REQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKT 88
           REQDR+LPIAN+SRIMKKALPAN KI+KDAKETVQECVSEFISFIT EASDKCQREKRKT
Sbjct: 22  REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKT 81

Query: 89  INGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
           INGDDLLWAM TLGFE+Y++PLKIYL +YRE+
Sbjct: 82  INGDDLLWAMTTLGFEEYVEPLKIYLQKYREM 113


>29629.m001382 ccaat-binding transcription factor subunit A,
           putative
          Length = 180

 Score =  176 bits (445), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 80/100 (80%), Positives = 93/100 (93%), Gaps = 3/100 (3%)

Query: 24  SNSNF---REQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDK 80
           +NS+F   +EQDR+LPIAN+SRIMKKALPAN KI+KDAKETVQECVSEFISF+T EASDK
Sbjct: 19  NNSDFLSPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDK 78

Query: 81  CQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
           CQREKRKTINGDDLLWAM TLGFE+Y++PLK+YL R+RE+
Sbjct: 79  CQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREL 118


>29966.m000228 ccaat-binding transcription factor subunit A,
           putative
          Length = 197

 Score =  174 bits (441), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 78/93 (83%), Positives = 88/93 (94%)

Query: 28  FREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRK 87
            +EQDR+LPIAN+SRIMKKALPAN KI+KDAKETVQECVSEFISFIT EASDKCQREKRK
Sbjct: 23  LKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRK 82

Query: 88  TINGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
           TINGDDLLWAM TLGFE+Y++PLKIYL ++RE+
Sbjct: 83  TINGDDLLWAMTTLGFEEYVEPLKIYLHKFREM 115


>29719.m000316 ccaat-binding transcription factor subunit A,
           putative
          Length = 220

 Score =  172 bits (437), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 76/92 (82%), Positives = 87/92 (94%)

Query: 29  REQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKT 88
           +EQDR+LPIAN+SRIMKK+LPAN KI+K+AKETVQECVSEFISFIT EASDKCQREKRKT
Sbjct: 22  KEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKT 81

Query: 89  INGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
           INGDDLLWAM TLGFE+Y+ PLK+YL++YRE 
Sbjct: 82  INGDDLLWAMTTLGFENYVGPLKVYLNKYRET 113


>29992.m001420 ccaat-binding transcription factor subunit A,
           putative
          Length = 233

 Score =  167 bits (422), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 71/91 (78%), Positives = 85/91 (93%)

Query: 30  EQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTI 89
           EQDR+LPIAN+ RIMKK +P NGKI+KDAKETVQECVSEFISF+T EASDKCQREKRKTI
Sbjct: 61  EQDRFLPIANVGRIMKKVIPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTI 120

Query: 90  NGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
           NG+D++WA+ TLGFEDY+ PLK+Y+S+YRE+
Sbjct: 121 NGEDIIWAITTLGFEDYVAPLKLYISKYREI 151


>29726.m004023 ccaat-binding transcription factor subunit A,
           putative
          Length = 158

 Score =  146 bits (369), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 63/90 (70%), Positives = 78/90 (86%)

Query: 31  QDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTIN 90
           QDR LPIAN+ RIMK+ LP N KI+K+AKET+QECVSEFISF+TSEAS+KC++E+RKT+N
Sbjct: 42  QDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTSEASEKCRKERRKTVN 101

Query: 91  GDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
           GDD+ WAM  LGF+DY  PL+ YL RYRE+
Sbjct: 102 GDDVCWAMGALGFDDYAGPLRRYLQRYREL 131


>29629.m001369 ccaat-binding transcription factor subunit A,
           putative
          Length = 252

 Score =  145 bits (366), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 60/92 (65%), Positives = 81/92 (88%)

Query: 29  REQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKT 88
           REQD+Y+PIAN+ RIM++ LP + KI+ DAKET+QECVSE+ISFIT EA+D+CQRE+RKT
Sbjct: 73  REQDQYMPIANVIRIMRRILPPHAKISDDAKETIQECVSEYISFITGEANDRCQREQRKT 132

Query: 89  INGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
           I  +D+LWAM  LGF+DY++PL ++L+RYRE+
Sbjct: 133 ITAEDVLWAMGKLGFDDYVEPLTLFLNRYREM 164


>57991.m000014 ccaat-binding transcription factor subunit A,
           putative
          Length = 173

 Score =  144 bits (363), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 61/92 (66%), Positives = 82/92 (89%)

Query: 29  REQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKT 88
           REQDR++PIAN+ RIM++ LP + KI+ DAKET+QECVSE+ISFITSEA+++CQRE+RKT
Sbjct: 29  REQDRFMPIANVIRIMRRILPPHAKISDDAKETIQECVSEYISFITSEANERCQREQRKT 88

Query: 89  INGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
           I  +D+L+AM+ LGF+DYI+PL +YL RYRE+
Sbjct: 89  ITAEDVLYAMSKLGFDDYIEPLTVYLHRYREL 120


>30128.m008801 ccaat-binding transcription factor subunit A,
           putative
          Length = 158

 Score =  130 bits (328), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 54/91 (59%), Positives = 74/91 (81%)

Query: 30  EQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTI 89
           EQDR LPIAN+ R+MK+ LP   KI+K+AKET+QEC +EFISF+T EASDKC +E RKT+
Sbjct: 4   EQDRLLPIANVCRVMKQILPPTAKISKEAKETMQECATEFISFVTGEASDKCHKENRKTV 63

Query: 90  NGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
           NGDD+ WA+++LGF++Y + +  YL ++RE 
Sbjct: 64  NGDDICWALSSLGFDNYAEAIVRYLHKFREA 94


>30129.m000351 ccaat-binding transcription factor subunit A,
           putative
          Length = 117

 Score =  104 bits (259), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 44/62 (70%), Positives = 56/62 (90%)

Query: 44  MKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGF 103
           MK+ LP+N KI+K+AKET+QECVSEFISF+T EASDKC +EKRKT+NGDD+ WA+ATLG+
Sbjct: 1   MKQILPSNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALATLGY 60

Query: 104 ED 105
            +
Sbjct: 61  RE 62


>30174.m008742 TATA-binding protein-associated phosphoprotein,
           putative
          Length = 155

 Score = 71.6 bits (174), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 57/78 (73%)

Query: 31  QDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTIN 90
           +D  LP A +++I+K+ LP + ++A+DA++ + EC  EFI+ ++SE+++ C RE+++TI 
Sbjct: 12  EDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSREEKRTIA 71

Query: 91  GDDLLWAMATLGFEDYID 108
            + +L A+  LGF +YI+
Sbjct: 72  PEHVLKALEVLGFGEYIE 89


>30055.m001567 DNA polymerase epsilon P17 subunit, putative
          Length = 157

 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 39/66 (59%)

Query: 54  IAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIY 113
           I KD+     E    FI ++++ A+D C+   R+T+N DD+  A+  + F ++I PLK  
Sbjct: 52  IPKDSVAVFSETARIFIHYLSATANDICKEANRQTMNADDVFKALEEIEFSEFIRPLKAS 111

Query: 114 LSRYRE 119
           L+ +++
Sbjct: 112 LNEFKQ 117