Jatropha Genome Database

JcCB0175951.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0175951.10 + phase: 1 /partial
         (514 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29682.m000571 hmg-CoA reductase, putative                             911   0.0  
30170.m013805 hmg-CoA reductase, putative                             853   0.0  
30162.m001288 hmg-CoA reductase, putative                             809   0.0  

>29682.m000571 hmg-CoA reductase, putative
          Length = 576

 Score =  911 bits (2355), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/526 (84%), Positives = 482/526 (91%), Gaps = 15/526 (2%)

Query: 1   YFLLHRWREKIRNSTPLHIVNFPEIAALVCLVASVIYLLGFFGIGFVHSFTSKVSTDAWE 60
           YFLLHRWREKIRNSTPLHI+ FPEIAAL CLVASVIYLLGFFGIGFV SFTSK   D  E
Sbjct: 54  YFLLHRWREKIRNSTPLHILTFPEIAALFCLVASVIYLLGFFGIGFVQSFTSK---DIVE 110

Query: 61  IEEYDVVKKDTRSPGPCAASLDC------------SVHPTTKIAPIPLSDDDEQIINSVV 108
             +++++K++TR PGPC ASLD             +V P T   P  LS DD++IINSV+
Sbjct: 111 DYDHNILKQETRLPGPCPASLDNDNVPPLKPKTTKAVPPNTLAPPPTLSSDDDEIINSVL 170

Query: 109 SGSIPSYSLESKLGDCRRAAAIRRESLQRMTGRSLEGLPLDGFDYESILGQCCEMPIGYV 168
           SGS+PSYSLESKLGDC+RAAAIRRE+LQRMTGRSLEGLPLDGFDYESILGQCCEMPIGYV
Sbjct: 171 SGSLPSYSLESKLGDCKRAAAIRREALQRMTGRSLEGLPLDGFDYESILGQCCEMPIGYV 230

Query: 169 QIPVGIAGPLLLDGIEYTVPMATTEGCLVASTNRGCKAIYVSGGATSTLFRDGMTRAPVV 228
           QIPVGIAGPLLLDG EYTVPMATTEGCLVASTNRGCKAIYVSGGATSTL RDGMTRAPVV
Sbjct: 231 QIPVGIAGPLLLDGNEYTVPMATTEGCLVASTNRGCKAIYVSGGATSTLLRDGMTRAPVV 290

Query: 229 RFPTAKRASDLKFFIEDPTSFDTIAVVFNKSSRFAKLQGVKCAIAGKNLYMRFNCNTGDA 288
           RF TA+RA++LKFF+EDP +FDTIA+VFNKSSRF +LQ V+CAIAGKNLYMRF C+TGDA
Sbjct: 291 RFQTAQRAAELKFFMEDPNNFDTIALVFNKSSRFGRLQSVQCAIAGKNLYMRFRCSTGDA 350

Query: 289 MGMNMVSKGVQNVLDYLRDDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEAIIKE 348
           MGMNMVSKGVQNVLDYL+++FPDMDVIGISGNFCSDKK AAVNWIEGRGKSVVCEAI+KE
Sbjct: 351 MGMNMVSKGVQNVLDYLQNEFPDMDVIGISGNFCSDKKAAAVNWIEGRGKSVVCEAIVKE 410

Query: 349 EVVRKVLKTNVAALVELNMLKNLTGSAVAGALGGFNAHASNIVTAVYIATGQDPAQNVES 408
           EVV+KVLKTNVAALVELN+LKNLTGSAVAGALGGFNAHASNIVTAVY+ATGQDPAQNVES
Sbjct: 411 EVVKKVLKTNVAALVELNVLKNLTGSAVAGALGGFNAHASNIVTAVYLATGQDPAQNVES 470

Query: 409 SHCITMMEAVNDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKELPGSNS 468
           SHCITMMEAVNDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGV+GASK+ PGSNS
Sbjct: 471 SHCITMMEAVNDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVRGASKDSPGSNS 530

Query: 469 RLLASIVAGSVLAGELSLMSALAAGQLVKSHMRYNRSSKDVPKIAS 514
           RLLA+IVAGSVLAGELSLMSALAAGQLV+SHM+YNRSSKDV K AS
Sbjct: 531 RLLATIVAGSVLAGELSLMSALAAGQLVRSHMKYNRSSKDVSKTAS 576


>30170.m013805 hmg-CoA reductase, putative
          Length = 576

 Score =  853 bits (2203), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/519 (78%), Positives = 472/519 (90%), Gaps = 9/519 (1%)

Query: 1   YFLLHRWREKIRNSTPLHIVNFPEIAALVCLVASVIYLLGFFGIGFVHSFTSKVSTDAWE 60
           Y+LLHRWR+KIRNSTPLH++   EIAA+V L+AS IYLLGFFGI FV SF ++ S ++W+
Sbjct: 62  YYLLHRWRDKIRNSTPLHVLTLSEIAAIVSLIASFIYLLGFFGIDFVQSFITRASHESWD 121

Query: 61  IEEYD---VVKKDTR--SPGPCAASLDCSVHPTTKIAPIPLSDDDEQIINSVVSGSIPSY 115
           ++  D   ++++D R  +  P  + L  S    T++A    S++DE+I+ SVV+G+IPSY
Sbjct: 122 LDGADPDYLIREDHRLVTCPPIPSKLPISESIITRLA----SEEDEEIVKSVVNGTIPSY 177

Query: 116 SLESKLGDCRRAAAIRRESLQRMTGRSLEGLPLDGFDYESILGQCCEMPIGYVQIPVGIA 175
           SLESKLGDC+RAA IRRE+LQRM GRSLEGLPL+GFDYESILGQCCEMP+GYVQIPVGIA
Sbjct: 178 SLESKLGDCKRAATIRREALQRMMGRSLEGLPLEGFDYESILGQCCEMPVGYVQIPVGIA 237

Query: 176 GPLLLDGIEYTVPMATTEGCLVASTNRGCKAIYVSGGATSTLFRDGMTRAPVVRFPTAKR 235
           GPLLLDG EY+VPMATTEGCLVASTNRGCKAI++SGGA S L +DGMTRAPVVRF +A R
Sbjct: 238 GPLLLDGREYSVPMATTEGCLVASTNRGCKAIHLSGGANSVLLKDGMTRAPVVRFGSAAR 297

Query: 236 ASDLKFFIEDPTSFDTIAVVFNKSSRFAKLQGVKCAIAGKNLYMRFNCNTGDAMGMNMVS 295
           A++LKFF+E+P +FDT++VVFN+SSRFAKLQ ++CAIAGKNLYMRF+C+TGDAMGMNMVS
Sbjct: 298 AAELKFFLENPENFDTLSVVFNRSSRFAKLQAIQCAIAGKNLYMRFSCSTGDAMGMNMVS 357

Query: 296 KGVQNVLDYLRDDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEAIIKEEVVRKVL 355
           KGVQNVLD+L++DFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEAIIKEEVV+KVL
Sbjct: 358 KGVQNVLDFLQNDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEAIIKEEVVKKVL 417

Query: 356 KTNVAALVELNMLKNLTGSAVAGALGGFNAHASNIVTAVYIATGQDPAQNVESSHCITMM 415
           KTNVA+LVELN+LKNLTGSAVAGALGGFNAHA+NIV+A++IATGQDPAQNVESSHCITMM
Sbjct: 418 KTNVASLVELNVLKNLTGSAVAGALGGFNAHAANIVSAIFIATGQDPAQNVESSHCITMM 477

Query: 416 EAVNDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKELPGSNSRLLASIV 475
           EAVNDGKDLH+SVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKE PGSNSRLLA+IV
Sbjct: 478 EAVNDGKDLHVSVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNSRLLATIV 537

Query: 476 AGSVLAGELSLMSALAAGQLVKSHMRYNRSSKDVPKIAS 514
           AGSVLAGELSLMSA+AAGQLVKSHM+YNRSS+DV K AS
Sbjct: 538 AGSVLAGELSLMSAIAAGQLVKSHMKYNRSSRDVSKAAS 576


>30162.m001288 hmg-CoA reductase, putative
          Length = 586

 Score =  809 bits (2089), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/533 (75%), Positives = 447/533 (83%), Gaps = 21/533 (3%)

Query: 1   YFLLHRWREKIRNSTPLHIVNFPEIAALVCLVASVIYLLGFFGIGFVHSFTSKVSTD--A 58
           YFLL RWREKIR STPLH+V   EIAA+   +AS IYLLGFFG  FV S   +  TD   
Sbjct: 56  YFLLSRWREKIRTSTPLHVVTLSEIAAIFGFIASFIYLLGFFGFDFVQSLILRPPTDDDV 115

Query: 59  WEIEEYDVVKKDTRSPGPCAASLDCSVH--------------PTT-KIAPIPLSDDDEQI 103
           WE+E  D + KD      C  +LDCS+               PT        L ++DE+I
Sbjct: 116 WEVE--DALLKDDSRRFSCGQALDCSLSSPPQPPKPKVVEEIPTAISSTTFDLGEEDEEI 173

Query: 104 INSVVSGSIPSYSLESKLGDCRRAAAIRRESLQRMTGRSLEGLPLDGFDYESILGQCCEM 163
           I SVV G  PSYSLESKLGDC+RAAAIRR +L+R+TG+SL GLPL+GFDY SILGQCCEM
Sbjct: 174 IRSVVDGKTPSYSLESKLGDCKRAAAIRRLALERITGKSLSGLPLEGFDYNSILGQCCEM 233

Query: 164 PIGYVQIPVGIAGPLLLDGIEYTVPMATTEGCLVASTNRGCKAIYVSGGATSTLFRDGMT 223
           PIGYVQIPVGIAGPLLLDG EY+VPMATTEGCLVASTNRGCKAI++SGGATS L RDGMT
Sbjct: 234 PIGYVQIPVGIAGPLLLDGKEYSVPMATTEGCLVASTNRGCKAIHLSGGATSVLLRDGMT 293

Query: 224 RAPVVRFPTAKRASDLKFFIEDPTSFDTIAVVFNKSSRFAKLQGVKCAIAGKNLYMRFNC 283
           RAPVVRF TAKRA+ LK ++EDP++FD I+  FNKSSRF +LQ +KCAIAGKNLY+RF C
Sbjct: 294 RAPVVRFGTAKRAAQLKLYLEDPSNFDVISSAFNKSSRFGRLQNIKCAIAGKNLYLRFCC 353

Query: 284 NTGDAMGMNMVSKGVQNVLDYLRDDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCE 343
           +TGDAMGMNMVSKGVQNVLD+L++ FPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCE
Sbjct: 354 STGDAMGMNMVSKGVQNVLDFLQNHFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCE 413

Query: 344 AIIKEEVVRKVLKTNVAALVELNMLKNLTGSAVAGALGGFNAHASNIVTAVYIATGQDPA 403
           AIIK  +V+KVLKT+V ALVELNMLKNLTGSA+AGALGGFNAHASNIVTAVYIATGQDPA
Sbjct: 414 AIIKGNMVKKVLKTSVEALVELNMLKNLTGSAMAGALGGFNAHASNIVTAVYIATGQDPA 473

Query: 404 QNVESSHCITMMEAVNDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKEL 463
           QNVESSHCITMMEAVNDG+DLH+SVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKE 
Sbjct: 474 QNVESSHCITMMEAVNDGQDLHVSVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKET 533

Query: 464 PGSNSRLLASIVAGSVLAGELSLMSALAAGQLVKSHMRYNR--SSKDVPKIAS 514
           PG+NSRLLASIVAGSVLAGELSLM+ALAAGQLV+SHM+YNR  +  DV K +S
Sbjct: 534 PGANSRLLASIVAGSVLAGELSLMAALAAGQLVRSHMKYNRAPTQNDVSKPSS 586