Jatropha Genome Database

JcCB0175111.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0175111.20 - phase: 0 /partial
         (110 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30169.m006313 thiosulfate sulfertansferase, putative                  211   6e-56
34439.m000021 thiosulfate sulfertansferase, putative                   67   1e-12

>30169.m006313 thiosulfate sulfertansferase, putative
          Length = 376

 Score =  211 bits (537), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 98/110 (89%), Positives = 103/110 (93%)

Query: 1   MDVFSSCRFDGAAPEPRKGIKSGHIPGSKCIPFPQMLDASQTLLPADELKKRFDQEGISL 60
           +D  S  RFDGAAPEPRKGI+SGH+PGSKCIPFPQMLDASQTLLPADELKKRFDQEGISL
Sbjct: 267 IDARSKARFDGAAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFDQEGISL 326

Query: 61  ESSIVTSCGTGVTACILALGLHRLGKQDVAVYDGSWTEWGAHPDTPVDTS 110
           ES + TSCGTGVTACILALG+HRLGKQDV VYDGSWTEWGAHPDTPVDTS
Sbjct: 327 ESPVFTSCGTGVTACILALGMHRLGKQDVPVYDGSWTEWGAHPDTPVDTS 376


>34439.m000021 thiosulfate sulfertansferase, putative
          Length = 426

 Score = 67.4 bits (163), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 2/78 (2%)

Query: 22  SGHIPGSKCIPFPQMLDASQTLLPADELKKRFDQEGISLESSIVTSCGTGVTACILALGL 81
           +GHIPG++  P+ Q  D     L AD  ++R      +  S I+  CG+GVTAC+  L L
Sbjct: 347 AGHIPGARNFPWQQASDTQAGWLAADAQRERLGDAATA--SEIIVYCGSGVTACVNLLAL 404

Query: 82  HRLGKQDVAVYDGSWTEW 99
             LG+ D  +Y GSW++W
Sbjct: 405 AELGRDDAKLYAGSWSDW 422