Jatropha Genome Database

JcCB0173361.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0173361.10 + phase: 0 
         (191 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29900.m001589 pyruvate decarboxylase, putative                        364   e-101
29601.m000442 pyruvate decarboxylase, putative                        345   8e-96
30138.m003964 pyruvate decarboxylase, putative                        277   3e-75
30138.m003963 pyruvate decarboxylase, putative                        269   6e-73

>29900.m001589 pyruvate decarboxylase, putative
          Length = 589

 Score =  364 bits (934), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 171/189 (90%), Positives = 179/189 (94%)

Query: 3   KEMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAARTKRV 62
           + +LSG+TAVIAETGDSWFNCQKL LPENCGYEFQMQYGSIGWSVGATLGYAQAAR KRV
Sbjct: 401 QAILSGETAVIAETGDSWFNCQKLHLPENCGYEFQMQYGSIGWSVGATLGYAQAARNKRV 460

Query: 63  IACIGDGSFQVTAQDISTMIRLGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVN 122
           IACIGDGSFQVTAQDISTMIR GQ++IIFLINNGGYTIEVEIHDGPYNVIKNW+YTGLVN
Sbjct: 461 IACIGDGSFQVTAQDISTMIRSGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVN 520

Query: 123 AIHNDEGKCWTAKVRTEEQLREAIATATGEQKGSLCFIEVLVHKDDTSKELLEWGSRVSA 182
           AIHN EGKCWTAKV TEE+L EAIATA GEQK SLCFIEVLVHKDDTSKELLEWGSRVS+
Sbjct: 521 AIHNGEGKCWTAKVHTEEELTEAIATAMGEQKDSLCFIEVLVHKDDTSKELLEWGSRVSS 580

Query: 183 ANSRPPNPQ 191
           AN RPPNPQ
Sbjct: 581 ANGRPPNPQ 589


>29601.m000442 pyruvate decarboxylase, putative
          Length = 607

 Score =  345 bits (885), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 161/189 (85%), Positives = 174/189 (92%)

Query: 3   KEMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAARTKRV 62
           ++MLS +TAVIAETGDSWFNCQKL+LP+ CGYEFQMQYGSIGWSVGATLGYAQA   KRV
Sbjct: 419 QKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQAVPEKRV 478

Query: 63  IACIGDGSFQVTAQDISTMIRLGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVN 122
           IACIGDGSFQVTAQD+STM+R GQKTIIFLINNGGYTIEVEIHDGPYNVIKNW+YTGLV+
Sbjct: 479 IACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVD 538

Query: 123 AIHNDEGKCWTAKVRTEEQLREAIATATGEQKGSLCFIEVLVHKDDTSKELLEWGSRVSA 182
           AIHN EGKCWTAKV+ EE+L EAI TAT  +K  LCFIEV+ HKDDTSKELLEWGSRVSA
Sbjct: 539 AIHNGEGKCWTAKVQCEEELIEAIETATESKKDCLCFIEVIAHKDDTSKELLEWGSRVSA 598

Query: 183 ANSRPPNPQ 191
           ANSRPPNPQ
Sbjct: 599 ANSRPPNPQ 607


>30138.m003964 pyruvate decarboxylase, putative
          Length = 595

 Score =  277 bits (708), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 129/189 (68%), Positives = 154/189 (81%)

Query: 3   KEMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAARTKRV 62
           ++ML GD  V+AE GDSWF+CQKL+LP+ CGYE Q+ Y SIGWSVGATLGYAQA   KRV
Sbjct: 402 QKMLIGDMVVVAEVGDSWFHCQKLKLPQGCGYESQILYASIGWSVGATLGYAQAKPDKRV 461

Query: 63  IACIGDGSFQVTAQDISTMIRLGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVN 122
           IA IGDGSFQ++ QD+STM+R G K+IIFLINNGGYTIE EIHDGPYNVI NW+YT LVN
Sbjct: 462 IAFIGDGSFQMSPQDVSTMLRCGHKSIIFLINNGGYTIETEIHDGPYNVINNWNYTELVN 521

Query: 123 AIHNDEGKCWTAKVRTEEQLREAIATATGEQKGSLCFIEVLVHKDDTSKELLEWGSRVSA 182
           A+ N  G+CWTAKV  EE+L  A+ TA  ++K  LCFIEV+VH+DDTSKELL+   R+++
Sbjct: 522 AMDNGFGRCWTAKVGCEEELIGAMETAMVDKKECLCFIEVIVHRDDTSKELLQLVCRLAS 581

Query: 183 ANSRPPNPQ 191
           ANSRPP  Q
Sbjct: 582 ANSRPPYLQ 590


>30138.m003963 pyruvate decarboxylase, putative
          Length = 548

 Score =  269 bits (687), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 125/186 (67%), Positives = 151/186 (81%), Gaps = 2/186 (1%)

Query: 3   KEMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAARTKRV 62
           ++ML GD  V+AE GDSWF+CQKL+LP+ CGYE QM Y SIGWSVGATLGYAQA   KRV
Sbjct: 357 QKMLLGDMVVVAEVGDSWFHCQKLKLPQGCGYESQMLYASIGWSVGATLGYAQAEPDKRV 416

Query: 63  IACIGDGSFQVTAQDISTMIRLGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVN 122
           IA IGDGSFQ++ QD+STM+R G K+IIFLINNGGYTIE EIHDGPYN+I NW+YT LVN
Sbjct: 417 IAFIGDGSFQMSPQDVSTMLRCGHKSIIFLINNGGYTIEAEIHDGPYNIINNWNYTELVN 476

Query: 123 AIHNDEGKCWTAKVRTEEQLREAIATATGEQKGSLCFIEVLVHKDDTSKELLEWGSRVSA 182
           A+ N  G+CWT  V   E+L  A+ TA  ++K  LCFIEV+VH+DDTSKELL++  R+++
Sbjct: 477 AMDNAVGRCWT--VGCGEELIRAMETAMVDKKECLCFIEVIVHRDDTSKELLQFVCRLAS 534

Query: 183 ANSRPP 188
           ANSRPP
Sbjct: 535 ANSRPP 540