Jatropha Genome Database

JcCB0171941.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0171941.10 - phase: 0 /pseudo
         (271 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30169.m006452 DNA-damage-inducible protein f, putative                372   e-103
27810.m000635 DNA-damage-inducible protein f, putative                272   2e-73
29606.m000098 DNA-damage-inducible protein f, putative                255   1e-68
29606.m000099 DNA-damage-inducible protein f, putative                251   2e-67
29820.m001007 DNA-damage-inducible protein f, putative                149   1e-36
30122.m000355 DNA-damage-inducible protein f, putative                139   2e-33
29830.m001422 DNA-damage-inducible protein f, putative                129   2e-30

>30169.m006452 DNA-damage-inducible protein f, putative
          Length = 522

 Score =  372 bits (954), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 192/246 (78%), Positives = 207/246 (84%), Gaps = 2/246 (0%)

Query: 1   MAEEDDASYPSMEKKRIPLCIFFKDFRHVLKMDELGLEXXXXXXXXXXXXXXXXXXXLVD 60
           M EEDD +YP+MEKKR  +CIFF DFR+VLK+DELGLE                   LVD
Sbjct: 2   MPEEDD-TYPAMEKKRPTVCIFFNDFRNVLKLDELGLEIARIALPAALALTADPIASLVD 60

Query: 61  TAFIGQIGPVELAAVGVSIALFNQVSRIAIFPLVSVTTSFVAEEDTIGSVNPEVQDSESL 120
           TAFIGQIG VELAAVGVSIALFNQVSRIAIFPLVS+TTSFVAEEDTIG + P+VQ+SE L
Sbjct: 61  TAFIGQIGSVELAAVGVSIALFNQVSRIAIFPLVSITTSFVAEEDTIGRMTPDVQESELL 120

Query: 121 ETGSVVNSESKELIPQNVSGEGAYKSKSAMSSFDIAKMESGRRHIPSASSALVIGAILGF 180
           ETGS VN ESKELIPQN S  GAYKSKS +SSFD A +E+ R+HIPSASSALVIGAILGF
Sbjct: 121 ETGSTVN-ESKELIPQNDSASGAYKSKSPISSFDTANIENERKHIPSASSALVIGAILGF 179

Query: 181 IQAIFLISGAKPLLNFMGVGSDSPMLRPAQQYLTLRSLGAPAVLLSLAMQGVFRGFKDTK 240
           +QAIFLISGAKPLLNFMGV SDSPML PAQQYLTLRSLGAPA+LLSLAMQGVFRGFKDTK
Sbjct: 180 VQAIFLISGAKPLLNFMGVSSDSPMLTPAQQYLTLRSLGAPAILLSLAMQGVFRGFKDTK 239

Query: 241 TPLYAT 246
           TPLYAT
Sbjct: 240 TPLYAT 245


>27810.m000635 DNA-damage-inducible protein f, putative
          Length = 906

 Score =  272 bits (695), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 141/230 (61%), Positives = 168/230 (73%), Gaps = 5/230 (2%)

Query: 17  IPLCIFFKDFRHVLKMDELGLEXXXXXXXXXXXXXXXXXXXLVDTAFIGQIGPVELAAVG 76
           +PL +FF+D R+V + DELG+E                   L+DTAFIG +GPVELAAVG
Sbjct: 416 MPLLMFFRDTRYVFRKDELGIEIAQIAIPAALALAADPVASLIDTAFIGHLGPVELAAVG 475

Query: 77  VSIALFNQVSRIAIFPLVSVTTSFVAEEDTIGSVNPEVQDSESLETGSVVNSESKELIPQ 136
           VSIA+FNQVS+IAIFPLVSVTTSFVAEE+  G ++  VQ++ SLE G  VN E +EL+P+
Sbjct: 476 VSIAVFNQVSKIAIFPLVSVTTSFVAEENATGKLSTHVQENASLEYGFTVNKEMEELLPK 535

Query: 137 NVSGEGAYKSKSAMSSFDIAKMESGRRHIPSASSALVIGAILGFIQAIFLISGAKPLLNF 196
                GA  +K++  S    K    RRHIPSASSALV+G +LG IQA+ LI  AK +L++
Sbjct: 536 -----GASTNKTSSVSSTFTKRHDERRHIPSASSALVVGCVLGIIQALLLIFSAKTILSY 590

Query: 197 MGVGSDSPMLRPAQQYLTLRSLGAPAVLLSLAMQGVFRGFKDTKTPLYAT 246
           MGV SDSPML PAQQYL LRSLGAPAVLLSLAMQGVFRG KDTKTPLYAT
Sbjct: 591 MGVYSDSPMLIPAQQYLVLRSLGAPAVLLSLAMQGVFRGIKDTKTPLYAT 640


>29606.m000098 DNA-damage-inducible protein f, putative
          Length = 546

 Score =  255 bits (652), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 145/274 (52%), Positives = 174/274 (63%), Gaps = 35/274 (12%)

Query: 4   EDDASYPSMEKKRIPLCIFFKDFRHVLKMDELGLEXXXXXXXXXXXXXXXXXXXLVDTAF 63
           E+ A   +  K +IPL +FF+D R V K DELGLE                   L+DTAF
Sbjct: 3   ENGALQLTERKWKIPLLVFFRDARLVFKTDELGLEILRIAVPAAMALAADPVASLIDTAF 62

Query: 64  IGQIGPVELAAVGVSIALFNQVSRIAIFPLVSVTTSFVAEEDTIGSVNPEVQDSE----- 118
           IG +GPVE+AAVGVSIA+FNQ S++ IFPLVS+TTSFVAEEDT   +  E Q+ E     
Sbjct: 63  IGHLGPVEIAAVGVSIAIFNQASKVTIFPLVSITTSFVAEEDTFQRITNESQNGEGSEKD 122

Query: 119 ------------------SLETGSVVNSESKELIPQNVSGEGAYKSKSAMS-SF------ 153
                             +LE GS  +SE K+ IP    G+   K+ +  S SF      
Sbjct: 123 LPKTRDIKEVVPEDVMLENLEKGSATDSEKKDSIP----GDANCKATTCKSPSFFEGKSI 178

Query: 154 -DIAKMESGRRHIPSASSALVIGAILGFIQAIFLISGAKPLLNFMGVGSDSPMLRPAQQY 212
            D  K   GRRHIPSAS+AL++G ILG +QAIFLI  AKPLL+ MGV S SPML PA++Y
Sbjct: 179 KDEQKNNKGRRHIPSASTALIVGGILGLVQAIFLIFCAKPLLSIMGVKSGSPMLTPARKY 238

Query: 213 LTLRSLGAPAVLLSLAMQGVFRGFKDTKTPLYAT 246
           LTLR+LG+PAVLLSLAMQGVFRGFKDTKTPLYAT
Sbjct: 239 LTLRALGSPAVLLSLAMQGVFRGFKDTKTPLYAT 272


>29606.m000099 DNA-damage-inducible protein f, putative
          Length = 518

 Score =  251 bits (642), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 135/243 (55%), Positives = 165/243 (67%), Gaps = 1/243 (0%)

Query: 4   EDDASYPSMEKKRIPLCIFFKDFRHVLKMDELGLEXXXXXXXXXXXXXXXXXXXLVDTAF 63
           E+ A + +  K +IPL +FF+D R V KMDELGL+                   L+DTAF
Sbjct: 3   ENGALHLTERKWKIPLLVFFRDARLVFKMDELGLDILRIAVPAAMALAADPVASLIDTAF 62

Query: 64  IGQIGPVELAAVGVSIALFNQVSRIAIFPLVSVTTSFVAEEDTIGSVNPEVQDSESLETG 123
           IG +G VE+AAVGVSIA+ NQ S++ IFPLV +TTSFVAEEDT+  ++ E Q+ E  E  
Sbjct: 63  IGHLGAVEIAAVGVSIAIINQASKVTIFPLVYITTSFVAEEDTVQRISIESQNREGSEKD 122

Query: 124 SVVNSESKELIPQNVSGEGAYKSKSAMSSFDIAKMESGRRHIPSASSALVIGAILGFIQA 183
              N   KE+ P++   E   K  S     D  K   GRRHIPSAS AL++G +LG +QA
Sbjct: 123 LPKNRNMKEVAPEDAMLENLEKD-SISGDEDKPKNNKGRRHIPSASIALIVGGVLGLMQA 181

Query: 184 IFLISGAKPLLNFMGVGSDSPMLRPAQQYLTLRSLGAPAVLLSLAMQGVFRGFKDTKTPL 243
           IFLI  AKPLL+ MGV S SPML PA++YLTLR+LG+PAVLLSLAMQGVFRGFKDTKTPL
Sbjct: 182 IFLIFCAKPLLSIMGVKSGSPMLTPARKYLTLRALGSPAVLLSLAMQGVFRGFKDTKTPL 241

Query: 244 YAT 246
           YAT
Sbjct: 242 YAT 244


>29820.m001007 DNA-damage-inducible protein f, putative
          Length = 560

 Score =  149 bits (377), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 89/226 (39%), Positives = 125/226 (55%), Gaps = 30/226 (13%)

Query: 22  FFKDFRHVLKMDELGLEXXXXXXXXXXXXXXXXXXXLVDTAFIGQIGPVELAAVGVSIAL 81
           F    R   ++DE+G+E                   LVDTAFIG  G VELAAVGVS+++
Sbjct: 85  FVSRLRDGFRVDEIGIEILSIALPAALALAADPIASLVDTAFIGHTGAVELAAVGVSVSV 144

Query: 82  FNQVSRIAIFPLVSVTTSFVAEEDTIGSVNPEVQDSESLETGSVVNSESKELIPQNVSGE 141
           FN VS++   PL++VTTSFVAEE             ++L + +  N+ S  +I       
Sbjct: 145 FNLVSKLFNVPLLNVTTSFVAEE-------------QALLSKAKANNTSGIII------- 184

Query: 142 GAYKSKSAMSSFDIAKMESGRRHIPSASSALVIGAILGFIQAIFLISGAKPLLNFMGVGS 201
                     S      E G+ ++P+ S++L + A +G  +AI L  G+  L+N MG+  
Sbjct: 185 ----------SLYFENQEQGKAYLPAVSTSLALAAGVGIAEAIALFFGSGFLMNIMGIPV 234

Query: 202 DSPMLRPAQQYLTLRSLGAPAVLLSLAMQGVFRGFKDTKTPLYATG 247
           DSPM  PA+ +LT R+ GAP ++++LA QG FRGFKDTKTPLYA G
Sbjct: 235 DSPMRIPAENFLTWRAFGAPPIVIALAAQGTFRGFKDTKTPLYAIG 280


>30122.m000355 DNA-damage-inducible protein f, putative
          Length = 605

 Score =  139 bits (349), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 78/190 (41%), Positives = 111/190 (58%), Gaps = 28/190 (14%)

Query: 58  LVDTAFIGQIGPVELAAVGVSIALFNQVSRIAIFPLVSVTTSFVAEEDTIGSVNPEVQDS 117
           L++TA+IG++GPVEL + GVSI +FN +S++   PL+SV TSFVAEE      N  ++  
Sbjct: 152 LMETAYIGRLGPVELGSAGVSITIFNNISKLFNMPLLSVATSFVAEEIAKNGKNSSLEK- 210

Query: 118 ESLETGSVVNSESKELIPQNVSGEGAYKSKSAMSSFDIAKMESGRRHIPSASSALVIGAI 177
                  V+   S    P +V  E                    R+ + S S+AL++   
Sbjct: 211 -------VIQENSTNGKPTDVVAE--------------------RKQLSSVSTALLLAVG 243

Query: 178 LGFIQAIFLISGAKPLLNFMGVGSDSPMLRPAQQYLTLRSLGAPAVLLSLAMQGVFRGFK 237
           +G  +A+ L  G  P L  MG+  DSPM  PA+++L LR+LGAPA ++SLA+QGV RGFK
Sbjct: 244 IGIFEAVALSLGRGPFLKLMGITLDSPMCIPAERFLFLRALGAPAFVVSLALQGVLRGFK 303

Query: 238 DTKTPLYATG 247
           DTKTP+Y+ G
Sbjct: 304 DTKTPVYSLG 313


>29830.m001422 DNA-damage-inducible protein f, putative
          Length = 447

 Score =  129 bits (324), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/191 (38%), Positives = 117/191 (61%), Gaps = 36/191 (18%)

Query: 58  LVDTAFIGQIGPVELAAVGVSIALFNQVSRIAIFPLVSVTTSFVAEEDTIGSVNPEVQDS 117
           L++TA++G++GP+ELA+ GVS+++FN +S++   PL+SV TSFVAE+     ++    DS
Sbjct: 22  LMETAYVGRLGPLELASAGVSMSIFNIISKVFNIPLLSVATSFVAED-----ISRNANDS 76

Query: 118 ESLETGSVVNSESKELIPQNVSGEGAYKSKSAMSSFDIAKMESGRRHIPSASSALVIGAI 177
            S + G     +S  +I +                         R+ +PS S+AL++   
Sbjct: 77  GS-DGG-----DSNNIISE-------------------------RKLLPSVSTALLLATG 105

Query: 178 LGFIQAIFLISGAKPLLNFMGVGSDSPMLRPAQQYLTLRSLGAPAVLLSLAMQGVFRGFK 237
           +G  +A+ +  G+   LN MG+ S SPM  PA+++L +R++GAPAV+L LA+QG+FRGFK
Sbjct: 106 IGLFEALAMYLGSGVFLNMMGISSASPMRVPAEKFLKIRAIGAPAVVLYLAIQGIFRGFK 165

Query: 238 DTKTPLYATGM 248
           DTKTP+   G+
Sbjct: 166 DTKTPVLCLGL 176