Jatropha Genome Database

JcCB0171531.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0171531.10 - phase: 0 /partial
         (131 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30106.m000666 aminobutyrate aminotransferase, putative                141   1e-34

>30106.m000666 aminobutyrate aminotransferase, putative
          Length = 528

 Score =  141 bits (355), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 71/121 (58%), Positives = 83/121 (68%), Gaps = 11/121 (9%)

Query: 9   STLKNQLGSHSKHVAASGSSQKHLASAPCLAKLYGTEASLQKDD-----------STTDS 57
           S +  +LGS  KH  ASG+SQKHL     L +LY +E  +Q++            +  D+
Sbjct: 9   SRIGFELGSCVKHANASGTSQKHLFQTASLTRLYSSEGFVQRESDNGGSSILRPATVADN 68

Query: 58  RDGRGYKGHDMLAPFTAGWQSTDLHPLVIDKSEGSYVYDINGKKYLDSLAGLWCTALGND 117
            D   YKGHDMLAPFTAGWQSTDL PLVI+KSEGSYVYDING KYLDSLAGLWCTALG +
Sbjct: 69  FDNCSYKGHDMLAPFTAGWQSTDLDPLVIEKSEGSYVYDINGNKYLDSLAGLWCTALGGN 128

Query: 118 N 118
            
Sbjct: 129 E 129