Jatropha Genome Database

JcCB0159671.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0159671.10 + phase: 0 /pseudo/partial
         (226 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008623 Zeta-carotene desaturase, chloroplast precursor, p...   333   6e-92
30065.m001161 amine oxidase, putative                                  88   3e-18

>30128.m008623 Zeta-carotene desaturase, chloroplast precursor,
           putative
          Length = 964

 Score =  333 bits (853), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 158/170 (92%), Positives = 164/170 (96%)

Query: 19  PGIKRLLPSQWRESQFFNNIYELVGVPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNL 78
           PGIKRLLPSQWRES+FF+NIYELVGVPVVTVQLRY+GWVTELQDLERSRQ RQA+GLDNL
Sbjct: 363 PGIKRLLPSQWRESKFFDNIYELVGVPVVTVQLRYDGWVTELQDLERSRQSRQAVGLDNL 422

Query: 79  LYTPDADFSCFADLALTSPEDYYIEGQGSLLQCVLTPGDPYMPLSNDEIINRVSKQVLAL 138
           LYTPDADFSCFADLALTSPEDYYIEGQGSLLQCVLTPGDPYMPL N+EII RVSKQVL L
Sbjct: 423 LYTPDADFSCFADLALTSPEDYYIEGQGSLLQCVLTPGDPYMPLVNEEIIKRVSKQVLTL 482

Query: 139 FPSSQGLEVIWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLSGSVHK 188
           FPSSQGLEVIWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFL+GS  K
Sbjct: 483 FPSSQGLEVIWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTK 532


>30065.m001161 amine oxidase, putative
          Length = 597

 Score = 88.2 bits (217), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 99/189 (52%), Gaps = 21/189 (11%)

Query: 21  IKRLLPSQWRESQFFNNIYELVGVPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNLLY 80
           +K LLP  W+E  +F  + +LVGVPV+ V + ++            R+L+     D+LL+
Sbjct: 381 LKLLLPDNWKEIPYFKKLDKLVGVPVINVHIWFD------------RKLKNTY--DHLLF 426

Query: 81  TPDADFSCFADLALTSPEDYYIEGQGSLLQCVLTPGDPYMPLSNDEIINRVSKQVLALFP 140
           +     S +AD+++T  E YY   Q S+L+ V  P + ++  S++EII     ++  LFP
Sbjct: 427 SRSPLLSVYADMSVTCKE-YYNPNQ-SMLELVFAPAEEWVSRSDEEIIEATMMELAKLFP 484

Query: 141 SS-----QGLEVIWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLSGSVHKFLHLPDI 195
                     +++   VVK  +S+Y+  P  +P RP Q++P++ F+L+G   K  +L  +
Sbjct: 485 DEISADQSKAKIVKYHVVKTPRSVYKTVPNCEPCRPLQRSPIEGFYLAGDYTKQKYLASM 544

Query: 196 PRPAVRGMF 204
               + G +
Sbjct: 545 EGAVLSGKY 553