Jatropha Genome Database

JcCB0158231.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0158231.10 + phase: 1 /pseudo/partial
         (213 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29698.m000067 bacteriochlorophyll synthase, putative                  239   7e-64
27553.m000325 bacteriochlorophyll synthase, putative                   69   1e-12

>29698.m000067 bacteriochlorophyll synthase, putative
          Length = 432

 Score =  239 bits (610), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 124/196 (63%), Positives = 141/196 (71%), Gaps = 13/196 (6%)

Query: 1   FGDSRCRTCNILQRYYVPKFQRHRVKHYLRHSLEKSTVYQKNDSSFLVHAASGQPFEPQP 60
           F  SRCR   IL+R+ V K Q H VKH+LRHS E+ST+Y+KND+SFL HAAS QP + +P
Sbjct: 35  FEVSRCRAWTILERHNVVKSQHHYVKHHLRHSAERSTIYRKNDASFLAHAASEQPLQSEP 94

Query: 61  EAYNPKSASKSVLNAIDAFYRFSRPHTVIGT-------XXXXXXXXXXXXEKLSDLSPLF 113
           EAY PK  S  +L+++DAFYRFSRPHTVIGT                   +KLSDLSPLF
Sbjct: 95  EAYIPKKTSIPILDSLDAFYRFSRPHTVIGTVKFNISHALSIISVSLLAIQKLSDLSPLF 154

Query: 114 FTGVLEAVAAALMMNIYIVGLNQLSDIEIDKVNKPYLPLASGEYSTGTGVLIVTSFWIM- 172
            TGVLEAVAAALMMNIYIVGLNQL+DIEIDKVNKPYLPLASGEYS G GV+IVTSF IM 
Sbjct: 155 LTGVLEAVAAALMMNIYIVGLNQLTDIEIDKVNKPYLPLASGEYSVGMGVMIVTSFSIMS 214

Query: 173 -----VSASITFFWQL 183
                +  S   FW L
Sbjct: 215 FWLGWIVGSWPLFWAL 230


>27553.m000325 bacteriochlorophyll synthase, putative
          Length = 373

 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 9/110 (8%)

Query: 67  SASKSVLNAI----DAFYRFSRPHTVIGTXXXXXXXXXXXXEKLSDLSPLFFTGVLEAVA 122
           + S  VLN I    DA +RF RPHT+ GT             +  +L  + ++ +L+AV+
Sbjct: 90  AGSDPVLNKISEFKDACWRFLRPHTIRGTALGSTALVARALIENPNL--IKWSLLLKAVS 147

Query: 123 ---AALMMNIYIVGLNQLSDIEIDKVNKPYLPLASGEYSTGTGVLIVTSF 169
              A +  N YIVG+NQ+ DI IDKVNKPYLP+A+G+ S  +  L+V  F
Sbjct: 148 GLFALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWLLVIFF 197