Jatropha Genome Database

JcCB0156231.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0156231.10 + phase: 0 /partial
         (104 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013632 conserved hypothetical protein                          185   5e-48
28359.m000279 conserved hypothetical protein                          179   2e-46
29955.m001180 conserved hypothetical protein                          154   1e-38

>30170.m013632 conserved hypothetical protein
          Length = 762

 Score =  185 bits (469), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 84/104 (80%), Positives = 94/104 (90%)

Query: 1   MWDTVQQIAIYIHRFHNLDLFQQGFYQIKVTMRWEDSEYASIGTPARVVQYEAHDMDSDS 60
           MWD VQ+IAIYIH+FHNLDLFQQGFYQIKV+MRWED+ Y ++GTPARVVQYEA+D+ S+ 
Sbjct: 1   MWDAVQEIAIYIHKFHNLDLFQQGFYQIKVSMRWEDNAYTTLGTPARVVQYEANDLGSND 60

Query: 61  IYGAWRINDTDNSFLTQPFRIKYARQDVYLSVMISFDLSLSKYK 104
           I G WRIND DNSFLTQPFRIKYARQDV LSVM+SF LSLSKYK
Sbjct: 61  ICGTWRINDIDNSFLTQPFRIKYARQDVCLSVMVSFVLSLSKYK 104


>28359.m000279 conserved hypothetical protein
          Length = 808

 Score =  179 bits (454), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 79/103 (76%), Positives = 95/103 (92%)

Query: 1   MWDTVQQIAIYIHRFHNLDLFQQGFYQIKVTMRWEDSEYASIGTPARVVQYEAHDMDSDS 60
           M DTVQ+IAIYIHRFHNLDLFQQG+YQIK+++RWEDSEY S+GTPARVVQY++HD+ SD+
Sbjct: 40  MLDTVQEIAIYIHRFHNLDLFQQGWYQIKISVRWEDSEYTSVGTPARVVQYDSHDLGSDN 99

Query: 61  IYGAWRINDTDNSFLTQPFRIKYARQDVYLSVMISFDLSLSKY 103
            YG WRI+DTDNSF TQPFRIKYA+QD+ LS+MISF+LSLS +
Sbjct: 100 TYGVWRIDDTDNSFSTQPFRIKYAKQDICLSIMISFNLSLSGH 142


>29955.m001180 conserved hypothetical protein
          Length = 688

 Score =  154 bits (388), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 70/101 (69%), Positives = 85/101 (84%)

Query: 3   DTVQQIAIYIHRFHNLDLFQQGFYQIKVTMRWEDSEYASIGTPARVVQYEAHDMDSDSIY 62
           +T+ ++AIYIHRFHNLDLFQQG+YQIK++MR +DSEY S+GTPARVVQYEAH+  S   +
Sbjct: 31  ETLHEVAIYIHRFHNLDLFQQGWYQIKISMRLDDSEYKSVGTPARVVQYEAHEQGSIGAH 90

Query: 63  GAWRINDTDNSFLTQPFRIKYARQDVYLSVMISFDLSLSKY 103
           G W I+D DNSF TQPF IKYA+QDVYLS+MISF LSL  +
Sbjct: 91  GIWTIDDIDNSFSTQPFLIKYAKQDVYLSIMISFILSLHAH 131