Jatropha Genome Database
- JcCB0155711.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0155711.10 + phase: 0 /pseudo/partial
(283 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30138.m003942 LIGULELESS1 protein, putative 362 e-101
30174.m009082 LIGULELESS1 protein, putative 199 1e-51
29929.m004627 conserved hypothetical protein 138 2e-33
30147.m014478 Squamosa promoter-binding protein, putative 134 4e-32
29269.m000250 LIGULELESS1 protein, putative 132 1e-31
29929.m004641 LIGULELESS1 protein, putative 129 2e-30
30076.m004574 conserved hypothetical protein 127 6e-30
30174.m008803 LIGULELESS1 protein, putative 127 7e-30
30170.m014245 Squamosa promoter-binding protein, putative 126 1e-29
29889.m003388 Squamosa promoter-binding protein, putative 125 3e-29
30174.m008805 Squamosa promoter-binding protein, putative 125 3e-29
28211.m000132 Squamosa promoter-binding protein, putative 119 2e-27
30190.m011329 Squamosa promoter-binding protein, putative 114 4e-26
29983.m003158 Squamosa promoter-binding protein, putative 113 8e-26
29726.m003959 Squamosa promoter-binding protein, putative 97 1e-20
>30138.m003942 LIGULELESS1 protein, putative
Length = 557
Score = 362 bits (930), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/271 (68%), Positives = 203/271 (74%), Gaps = 5/271 (1%)
Query: 1 MQPWSYVHGGKDIVSRETISSSDTIAKSRNALLGWDLKTA-SFGNN-MVISSQQAIENQN 58
MQ W+YV GGK VS ET SSSD+IAKS+N L+GWDLKTA FGNN +V++ QQAIEN
Sbjct: 1 MQSWNYVSGGKGFVSNETASSSDSIAKSKNVLMGWDLKTACGFGNNNVVVAGQQAIENHC 60
Query: 59 FGHLSYQEMMGKQLPDNSIRVSLSSEVDVGKIINPFIVNNTNSFXXXXXXXXXXXXXXXX 118
FG L+YQE+MGKQLPDNSIR +LSSE D GK IN F+VN N F
Sbjct: 61 FGELNYQELMGKQLPDNSIRNALSSEADGGKSINHFMVN-MNVFSLEHESTSRLSRTVVE 119
Query: 119 XXXXXXXXFIDLKLGRFGDPTTDAQNSRTXXXXXXXXXXXXXNPPKRMRPGVNSHTAYCQ 178
FIDLKLGRFGDPT + NSR PPKR+R GVNSH A+CQ
Sbjct: 120 SNSRDSS-FIDLKLGRFGDPT-EGHNSRISKGASVMSSSESSTPPKRLRVGVNSHPAHCQ 177
Query: 179 VYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCR 238
VYGCNKDLSSSKEYHKRHKVCEVHSKT+KVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCR
Sbjct: 178 VYGCNKDLSSSKEYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCR 237
Query: 239 KRLAGHNERRRKPQVGLHAGRTGRLIQSYNA 269
KRLAGHNERRRKPQVG H+GRTG+L+QSYN
Sbjct: 238 KRLAGHNERRRKPQVGPHSGRTGKLLQSYNG 268
>30174.m009082 LIGULELESS1 protein, putative
Length = 512
Score = 199 bits (506), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/281 (42%), Positives = 148/281 (52%), Gaps = 33/281 (11%)
Query: 1 MQPWSYV--HGGKDIVSRETISSSDTIAKSRNALLGWDLKTASFGNNMVISSQQAIENQN 58
M W + G S E S+D+ +SR L GWD +++EN
Sbjct: 1 MDSWRFTTAEGKSLFFSDEIDVSTDSFGRSRKTLTGWD--------------GESVENME 46
Query: 59 FGHLSYQEMMGKQ----------LPDNSIRVSLSSEVDVGKIINPFIVNNTNSFXXXXXX 108
F L + EM +Q + +S V+ + + ++ +P + +NS
Sbjct: 47 FIDLGFSEMHKRQFYGTSNTGFGILGSSGEVNFDASSNKIELSSPSCMIASNS---SLES 103
Query: 109 XXXXXXXXXXXXXXXXXXFIDLKLGRFGDPTTDAQNSRTXXXXXXXXXXXXXNPPKRMRP 168
IDLKLGR GD D NS+ KR R
Sbjct: 104 GSNHSNSVMEANSHDSSSLIDLKLGRLGD-GKDVDNSKFLKERSVVSSVTPTFQAKRART 162
Query: 169 GVNS--HTAYCQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHL 226
+NS T +CQVYGCNKDLSS K+YHKRHKVCEVHSKT KVIVNG+EQRFCQQCSRFHL
Sbjct: 163 -MNSRTQTPFCQVYGCNKDLSSLKDYHKRHKVCEVHSKTPKVIVNGVEQRFCQQCSRFHL 221
Query: 227 LAEFDDGKRSCRKRLAGHNERRRKPQVGLHAGRTGRLIQSY 267
L EFDDGKRSCRKRLAGHNERRRKPQ G +GR +L+Q+Y
Sbjct: 222 LVEFDDGKRSCRKRLAGHNERRRKPQFGALSGRPHKLLQAY 262
>29929.m004627 conserved hypothetical protein
Length = 404
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 85/141 (60%), Gaps = 2/141 (1%)
Query: 128 IDLKLGRFGDPTTDAQNSRTXXXXXXXXXXXXXNPPKRMR-PGVNSHTAYCQVYGCNKDL 186
+DLKLG GD D + KR+R P +H C V GC DL
Sbjct: 43 VDLKLGNSGD-LEDKLVEKFSGPGDSLMESSSSGSSKRVRTPANGTHIPSCLVDGCASDL 101
Query: 187 SSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNE 246
S ++YH+RHKVCE+HSKT KV + G+EQRFCQQCSRFH L EFD+GKRSCRKRL GHN
Sbjct: 102 SKCRDYHRRHKVCELHSKTPKVFIKGLEQRFCQQCSRFHSLVEFDEGKRSCRKRLDGHNR 161
Query: 247 RRRKPQVGLHAGRTGRLIQSY 267
RRRKPQ + RL ++
Sbjct: 162 RRRKPQPDSMPVNSARLFSNH 182
>30147.m014478 Squamosa promoter-binding protein, putative
Length = 382
Score = 134 bits (337), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 86/142 (60%), Gaps = 3/142 (2%)
Query: 128 IDLKLGRFGDPTTDAQNS-RTXXXXXXXXXXXXXNPPKRMRPGVN-SHTAYCQVYGCNKD 185
IDLKLGR A N + KR R N + AYC V GC+ D
Sbjct: 44 IDLKLGRVSHSNDQAINQWKQPGADSKMECSSPSVSTKRARAANNGTQVAYCLVDGCSAD 103
Query: 186 LSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHN 245
LS+ ++YH+RHKVCE+HSKT +V + G ++RFCQQCSRFH L EFD+GKRSCRKRL GHN
Sbjct: 104 LSNCRDYHRRHKVCELHSKTPQVTIAGQKKRFCQQCSRFHSLEEFDEGKRSCRKRLDGHN 163
Query: 246 ERRRKPQVGLHAGRTGRLIQSY 267
RRRKPQ L R + +Y
Sbjct: 164 RRRRKPQPDL-LSRPASFLSNY 184
>29269.m000250 LIGULELESS1 protein, putative
Length = 349
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 67/92 (72%)
Query: 163 PKRMRPGVNSHTAYCQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCS 222
P R G CQV GC DLS +K Y+ RHKVC +HSK+ KVIV G+EQRFCQQCS
Sbjct: 34 PARKVHGGQQQPPRCQVEGCKVDLSDAKAYYSRHKVCGMHSKSPKVIVAGLEQRFCQQCS 93
Query: 223 RFHLLAEFDDGKRSCRKRLAGHNERRRKPQVG 254
RFH L EFD GKRSCR+RLAGHNERRRKP G
Sbjct: 94 RFHQLPEFDQGKRSCRRRLAGHNERRRKPPPG 125
>29929.m004641 LIGULELESS1 protein, putative
Length = 483
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 67/79 (84%)
Query: 174 TAYCQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDG 233
T CQV GCN DLSS+K+YH++H+VCE HSK KVIV G+E+RFCQQCSRFH L+EFD+
Sbjct: 185 TPRCQVEGCNLDLSSAKDYHRKHRVCENHSKCPKVIVAGLERRFCQQCSRFHGLSEFDEK 244
Query: 234 KRSCRKRLAGHNERRRKPQ 252
KRSCR+RL+ HN RRRKPQ
Sbjct: 245 KRSCRRRLSDHNARRRKPQ 263
>30076.m004574 conserved hypothetical protein
Length = 1012
Score = 127 bits (319), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 65/76 (85%)
Query: 175 AYCQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGK 234
A CQV C DLSS+K+YH+RHKVCE+HSK +K +V + QRFCQQCSRFH+L EFD+GK
Sbjct: 155 AVCQVEDCGADLSSAKDYHRRHKVCEMHSKASKALVGNVMQRFCQQCSRFHVLQEFDEGK 214
Query: 235 RSCRKRLAGHNERRRK 250
RSCR+RLAGHN+RRRK
Sbjct: 215 RSCRRRLAGHNKRRRK 230
>30174.m008803 LIGULELESS1 protein, putative
Length = 302
Score = 127 bits (319), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 68/87 (78%), Gaps = 1/87 (1%)
Query: 164 KRMRPGVNSHTAYCQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSR 223
+ + PG +S+ CQ GCN DL+ +K YH+RHKVCE HSK + VI G+ QRFCQQCSR
Sbjct: 139 RPVEPG-SSNAPRCQAEGCNADLTHAKHYHRRHKVCEFHSKASTVIAAGLTQRFCQQCSR 197
Query: 224 FHLLAEFDDGKRSCRKRLAGHNERRRK 250
FHLL+EFD+GKRSCRKRLA HN RRRK
Sbjct: 198 FHLLSEFDNGKRSCRKRLADHNRRRRK 224
>30170.m014245 Squamosa promoter-binding protein, putative
Length = 1073
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 71/93 (76%), Gaps = 2/93 (2%)
Query: 162 PPKRMRPGVNSHTAY--CQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQ 219
P KR+R G Y CQV C +DLS++K+YH+RHKVCE+HSK+ + +V QRFCQ
Sbjct: 132 PNKRVRSGSPGTATYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTQALVGKQMQRFCQ 191
Query: 220 QCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQ 252
QCSRFH L+EFD+GKRSCR+RLAGHN RRRK Q
Sbjct: 192 QCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQ 224
>29889.m003388 Squamosa promoter-binding protein, putative
Length = 1026
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 68/82 (82%)
Query: 169 GVNSHTAYCQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLA 228
G S+ A CQV C+ DLS++K+YH+RHKVC++HSK +K +V + QRFCQQCSRFH+L
Sbjct: 143 GNASNRAVCQVEDCSADLSNAKDYHRRHKVCDMHSKASKALVGNVMQRFCQQCSRFHVLQ 202
Query: 229 EFDDGKRSCRKRLAGHNERRRK 250
EFD+GKRSCR+RLAGHN RRRK
Sbjct: 203 EFDEGKRSCRRRLAGHNRRRRK 224
>30174.m008805 Squamosa promoter-binding protein, putative
Length = 262
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 65/74 (87%)
Query: 177 CQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRS 236
CQV GC+ L +K+YH+RHKVCE+HSK + VIV G+EQRFCQQCSRFH+++EFDD KRS
Sbjct: 168 CQVEGCHVALVKAKDYHRRHKVCEMHSKASNVIVLGLEQRFCQQCSRFHVVSEFDDAKRS 227
Query: 237 CRKRLAGHNERRRK 250
CR+RLAGHNERRRK
Sbjct: 228 CRRRLAGHNERRRK 241
>28211.m000132 Squamosa promoter-binding protein, putative
Length = 198
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 51/74 (68%), Positives = 60/74 (81%)
Query: 177 CQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRS 236
CQV C DL+ +K YH+RHKVCE+H+K V+V G+ QRFCQQCSRFH L EFD+ KRS
Sbjct: 73 CQVERCGADLTDAKRYHRRHKVCEIHAKAPAVVVAGLRQRFCQQCSRFHELVEFDEAKRS 132
Query: 237 CRKRLAGHNERRRK 250
CR+RLAGHNERRRK
Sbjct: 133 CRRRLAGHNERRRK 146
>30190.m011329 Squamosa promoter-binding protein, putative
Length = 141
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 61/81 (75%)
Query: 177 CQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRS 236
CQ C D++ +K YH+RHKVCE H+K V+V+GI QRFCQQCSRFH ++EFDD KRS
Sbjct: 57 CQAENCTFDMTEAKRYHRRHKVCEHHAKAPCVLVSGIHQRFCQQCSRFHEVSEFDDTKRS 116
Query: 237 CRKRLAGHNERRRKPQVGLHA 257
CR+RLAGHNERRRK H
Sbjct: 117 CRRRLAGHNERRRKSSSEYHG 137
>29983.m003158 Squamosa promoter-binding protein, putative
Length = 198
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 59/81 (72%)
Query: 177 CQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRS 236
CQ C DL+ +K YH+RHKVCE H+K V+V GI QRFCQQCSRFH L EFD+ KRS
Sbjct: 76 CQAEKCMADLNDAKPYHRRHKVCEYHAKAQIVLVAGIRQRFCQQCSRFHELIEFDETKRS 135
Query: 237 CRKRLAGHNERRRKPQVGLHA 257
CR+RLAGHNERRRK H
Sbjct: 136 CRRRLAGHNERRRKNTTESHT 156
>29726.m003959 Squamosa promoter-binding protein, putative
Length = 795
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 57/80 (71%)
Query: 171 NSHTAYCQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEF 230
+S CQV GC D+S K YHKRH+VC + V+++G +R+CQQC +FHLL +F
Sbjct: 141 SSGITRCQVPGCEVDISELKGYHKRHRVCLRCATAGSVLLDGHRKRYCQQCGKFHLLPDF 200
Query: 231 DDGKRSCRKRLAGHNERRRK 250
D+GKRSCR++L HN+RRR+
Sbjct: 201 DEGKRSCRRKLERHNDRRRR 220