Jatropha Genome Database

JcCB0154921.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0154921.10 + phase: 0 
         (362 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29905.m000443 transcription factor, putative                          379   e-106
30138.m003959 transcription factor, putative                          185   3e-47
29693.m001968 conserved hypothetical protein                          105   3e-23
30192.m000545 conserved hypothetical protein                           90   2e-18
29646.m001100 transcription factor, putative                           89   4e-18
29646.m001101 transcription factor, putative                           86   2e-17
30167.m000856 conserved hypothetical protein                           70   1e-12
29738.m001041 conserved hypothetical protein                           69   3e-12
30174.m008721 conserved hypothetical protein                           61   7e-10

>29905.m000443 transcription factor, putative
          Length = 377

 Score =  379 bits (974), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 221/381 (58%), Positives = 253/381 (66%), Gaps = 43/381 (11%)

Query: 1   MISSSKEVDSPSEKEGDHASSYHDHGXXXXXXXXXXXXXPWLRLKDPRIVRVSRAFGGKD 60
           MI++SKE DSP++KEG    S  DHG             PWLRLKDPRIVRVSRAFGGKD
Sbjct: 1   MINNSKEEDSPTKKEG----STRDHGKITSKASSSTST-PWLRLKDPRIVRVSRAFGGKD 55

Query: 61  RHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHXXXXXXXXX 120
           RHSKVCTIRGLRDRRVRLSVPTAIQLYDLQD+LGLNQPSKVVDWLLNAAKH         
Sbjct: 56  RHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDKLGLNQPSKVVDWLLNAAKHEIDELPPLP 115

Query: 121 XXXVNFALNHQAMLSSSEIGASQSNKLN-----SSISWEENQGVVLSSTRPNFWTTDAHL 175
              +NF LNHQ MLSS E+GASQSNK       SSI+W++  G+    TRPNFW +DA L
Sbjct: 116 MPPMNFGLNHQ-MLSSHELGASQSNKEGFKVNSSSINWDDQGGL----TRPNFWNSDALL 170

Query: 176 KNKSKHVA---TSEKENWTTRRNEE--------DNKQKSNEVAASSSFFPRTTHSSS-PA 223
           + KSK VA    +EKENWT R  E+        +N  ++    +S+S FPR THSS+  A
Sbjct: 171 RGKSKEVARDSVNEKENWTKRNEEDEQESNEEGNNSGRTQVPLSSTSLFPRATHSSTWAA 230

Query: 224 GLINNAIPYTSFFQLEHPSFPLSHMGSHGFVSQTDYHHDLHXXXXXXXXXXXXXXXXXQI 283
           G INN +PY SF QLEHP+FP SHMGSH F +QTD   DLH                 QI
Sbjct: 231 GFINNPMPYGSFLQLEHPNFPFSHMGSHAFSNQTD---DLHNLNAVPLPSTLSLSSGSQI 287

Query: 284 F--------PYFPSH---ATTEIDHPKQINHFQMLTPSAQTLFPNSLTPTPFSLNQSARP 332
                     Y PSH   A  EID P+Q+NHFQML  S Q LFPNSLTP+ +S+NQSARP
Sbjct: 288 LVCPPGVPQTYLPSHVNAAAAEID-PRQMNHFQMLASSTQNLFPNSLTPSSYSMNQSARP 346

Query: 333 FHFSVTNPRLFHSHNSGSQPD 353
           FHFS+T PRLFHS +SG+QPD
Sbjct: 347 FHFSLT-PRLFHSLDSGNQPD 366


>30138.m003959 transcription factor, putative
          Length = 371

 Score =  185 bits (469), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 139/394 (35%), Positives = 189/394 (47%), Gaps = 67/394 (17%)

Query: 1   MISSSKEVDSPSEKEGDHASSYHDHGXXXXXXXXXXXXXPWLRLKDPRIVRVSRAFGGKD 60
           MI+SS+E    +++EGD       +               W   ++PRIVRVSR+FGGKD
Sbjct: 1   MITSSREKGFQAKQEGDA------NDNNKKFSKAPSTSRQWSAFRNPRIVRVSRSFGGKD 54

Query: 61  RHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHXXXXXXXXX 120
           RHSKVCTIRGLRDRR+RLSVPTAIQLYDLQDRLGL+QPSKV+DWLL+A K          
Sbjct: 55  RHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLDATKDDIDKLPPLQ 114

Query: 121 XXXVNFALNHQAMLS---------------------SSEIGA-SQSNKL-NSSISWEENQ 157
                F   HQ ML                      + +IG  S   K+ NS++  +   
Sbjct: 115 LPQ-GFGQFHQQMLVSHESNSSQSSLAPFFDVNSTFNKDIGFHSLGIKVNNSNLDGDHQN 173

Query: 158 GVVLSSTRPNFWTTDAHLKNKSKHVATSEKENWTTRRNEEDNKQKSNEVAASSSFFP-RT 216
            +++  T+  +W  +A    ++   +TSEK  W    + E+N+   + V ++   FP  +
Sbjct: 174 SIIMGKTK--YWEAEAETSMRATSSSTSEKGKWVRTNDHEENQ---DGVLSAQKLFPLAS 228

Query: 217 THSSSPAGLINNAIPYTSFFQLEHPSFPLSHMGS-HGFVSQTDYHHDLHXXXXXXXXXXX 275
           THSS P GL+NN IP+ S +  +  +  LS  G+ HG +     +  L            
Sbjct: 229 THSSFP-GLLNNPIPFNSHYHWDASNLSLSQFGTNHGMIIPQPENSALDSNTSTVALPAF 287

Query: 276 XX---------XXXXQIFPYFPSHATT--EIDHPKQINHFQMLTPSAQTLFPNSLTPTPF 324
                           +FP +P +  T  E + P++ NHFQ LT S              
Sbjct: 288 SSGSQFFLCPPATVSSLFPQYPPYVATPLENNEPRETNHFQWLTSS-------------- 333

Query: 325 SLNQSARPFHFSVTNPRLFHSH---NSGSQPDKD 355
           S N   + F   V NP L H H   NS SQPDKD
Sbjct: 334 SANNPMKNFSLGV-NPGLVHHHSQRNSASQPDKD 366


>29693.m001968 conserved hypothetical protein
          Length = 497

 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 48/62 (77%), Positives = 54/62 (87%)

Query: 48  RIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLN 107
           RI+RV+RA GGKDRHSKV T +GLRDRRVRLSV TAIQ YDLQDRLG +QPSK V+WL+ 
Sbjct: 81  RIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIK 140

Query: 108 AA 109
           AA
Sbjct: 141 AA 142


>30192.m000545 conserved hypothetical protein
          Length = 595

 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/59 (67%), Positives = 47/59 (79%)

Query: 52  VSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAK 110
           + R+ G KDRHSKVCT +G RDRRVRLS  TAIQ YD+QDRLG ++PSK VDWL+  AK
Sbjct: 210 IVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAK 268


>29646.m001100 transcription factor, putative
          Length = 409

 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 39/59 (66%), Positives = 46/59 (77%)

Query: 52  VSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAK 110
           + R+ G KDRHSKVCT +G RDRRVRLS  TAI  YD+QDRLG ++PSK VDWL+  AK
Sbjct: 91  ILRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIDFYDVQDRLGYDRPSKAVDWLIKKAK 149


>29646.m001101 transcription factor, putative
          Length = 349

 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 39/59 (66%), Positives = 46/59 (77%)

Query: 52  VSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAK 110
           + R+ G KDRHSKV T +G RDRRVRLS  TAIQ YD+QDRLG ++PSK VDWL+  AK
Sbjct: 16  IVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAK 74


>30167.m000856 conserved hypothetical protein
          Length = 394

 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 41/52 (78%)

Query: 59  KDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAK 110
           K RHSK+CT +GLRDRRVRLS+  A + +DLQD LG ++ SK ++WLL+ ++
Sbjct: 95  KHRHSKICTAQGLRDRRVRLSIEIARKFFDLQDLLGFDKASKTLEWLLSKSR 146


>29738.m001041 conserved hypothetical protein
          Length = 449

 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 29/54 (53%), Positives = 39/54 (72%)

Query: 57  GGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAK 110
           G KDRHSK+ T +G RDRR+RLS+  A + +DLQD LG ++ SK +DWL   +K
Sbjct: 125 GKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIDWLFTKSK 178


>30174.m008721 conserved hypothetical protein
          Length = 315

 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 37/48 (77%)

Query: 59  KDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLL 106
           +DRHSK+ T +G RDRR+RLS+  A + +DLQD+L  ++ SK V+WLL
Sbjct: 42  RDRHSKIDTAQGPRDRRMRLSLKVAREFFDLQDKLCFDKASKTVEWLL 89