Jatropha Genome Database

JcCB0154691.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0154691.10 - phase: 0 /partial
         (157 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28124.m000244 Chorismate mutase, chloroplast precursor, putative      278   1e-75
30174.m009156 Chorismate mutase, chloroplast precursor, putative      233   3e-62
29848.m004541 chorismate mutase cm2, putative                         197   2e-51

>28124.m000244 Chorismate mutase, chloroplast precursor, putative
          Length = 321

 Score =  278 bits (710), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 134/158 (84%), Positives = 145/158 (91%), Gaps = 1/158 (0%)

Query: 1   VLHPIADSININKKVWDLYFRDVLPRLVKDGNDGNCGSTAVCDTICLQVLSKRIHYGKFV 60
           VLHP+ADSININ KVWD+YFRD+LPRLVKDG+DGN GSTAVCD ICLQVLSKRIHYGKFV
Sbjct: 164 VLHPLADSININNKVWDMYFRDLLPRLVKDGSDGNSGSTAVCDAICLQVLSKRIHYGKFV 223

Query: 61  AEAKFRNSPDAYKAAIRAQDRDRLMDLLTYSKVEEAIKKRVEMKAITFGQEVT-ICFGDE 119
           AEAKFRNSPDAY+AAIRAQDR RLM+LLTY+KVEEAIKKRVE+K  TFGQEVT IC  DE
Sbjct: 224 AEAKFRNSPDAYEAAIRAQDRYRLMELLTYTKVEEAIKKRVEIKTKTFGQEVTAICEEDE 283

Query: 120 DTDPVYKIDPGLVAELYGEWIMPLTKEVQVEYLLRRLD 157
            T+P YKID  LVA+LYG+WIMPLTKEVQVEYLLRRLD
Sbjct: 284 ITEPAYKIDTTLVADLYGDWIMPLTKEVQVEYLLRRLD 321


>30174.m009156 Chorismate mutase, chloroplast precursor, putative
          Length = 358

 Score =  233 bits (594), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 109/157 (69%), Positives = 128/157 (81%)

Query: 1   VLHPIADSININKKVWDLYFRDVLPRLVKDGNDGNCGSTAVCDTICLQVLSKRIHYGKFV 60
           VLHP A SININ+KVWD YF+D+LP LVK GNDGNCGS AV DT+CLQ LS+RIHYGKFV
Sbjct: 202 VLHPSAGSININRKVWDGYFKDLLPELVKTGNDGNCGSAAVYDTMCLQALSRRIHYGKFV 261

Query: 61  AEAKFRNSPDAYKAAIRAQDRDRLMDLLTYSKVEEAIKKRVEMKAITFGQEVTICFGDED 120
           AEAKFR SP  Y+AAI+ QD  +LM+LLTY  VE A+KKRVEMKA  FG+++TI    ++
Sbjct: 262 AEAKFRESPAVYEAAIKKQDGKKLMELLTYEFVEAAVKKRVEMKAKIFGRDITIASQVDE 321

Query: 121 TDPVYKIDPGLVAELYGEWIMPLTKEVQVEYLLRRLD 157
            +P+YK+ P LV  L+G WIMPLTKEVQVEYLLRRLD
Sbjct: 322 AEPIYKVQPSLVVNLFGNWIMPLTKEVQVEYLLRRLD 358


>29848.m004541 chorismate mutase cm2, putative
          Length = 253

 Score =  197 bits (500), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 90/156 (57%), Positives = 116/156 (74%), Gaps = 2/156 (1%)

Query: 2   LHPIADSININKKVWDLYFRDVLPRLVKDGNDGNCGSTAVCDTICLQVLSKRIHYGKFVA 61
           LHP A S+++NK++WD+YF  +LP  V  G+DGN  STA  D  CLQ LS+RIHYGKFVA
Sbjct: 100 LHPPAASVDVNKQIWDMYFNKLLPLFVTKGDDGNYASTAANDLNCLQALSRRIHYGKFVA 159

Query: 62  EAKFRNSPDAYKAAIRAQDRDRLMDLLTYSKVEEAIKKRVEMKAITFGQEVTICFGDEDT 121
           E KFR +P  Y+ AIR+QDRD LM++LT+  VEE +KKRV  KA  FGQ+V+   G+  +
Sbjct: 160 EVKFREAPQEYEPAIRSQDRDALMNMLTFKNVEETVKKRVAKKATVFGQDVS--HGNNTS 217

Query: 122 DPVYKIDPGLVAELYGEWIMPLTKEVQVEYLLRRLD 157
              YK+DP +++ LY EW+MPLTK V+VEYLLRRLD
Sbjct: 218 AEKYKVDPSILSHLYDEWVMPLTKLVEVEYLLRRLD 253