Jatropha Genome Database
- JcCB0153301.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0153301.10 + phase: 0 /partial
(546 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29739.m003713 Auxin response factor, putative 718 0.0
30185.m000956 Auxin response factor, putative 258 6e-69
30170.m014161 Auxin response factor, putative 151 7e-37
29769.m000463 Auxin response factor, putative 129 5e-30
30111.m000734 Auxin response factor, putative 100 3e-21
29609.m000587 Auxin response factor, putative 95 7e-20
30147.m014418 Auxin response factor, putative 94 1e-19
30068.m002516 hypothetical protein 91 1e-18
29742.m001397 Auxin response factor, putative 86 7e-17
30128.m008545 transcription factor, putative 82 7e-16
29841.m002748 Auxin-induced protein AUX22, putative 61 1e-09
29647.m002032 transcription factor, putative 60 4e-09
29609.m000586 Auxin response factor, putative 59 4e-09
29848.m004617 ATP binding protein, putative 58 1e-08
29844.m003175 Auxin-responsive protein IAA4, putative 56 4e-08
30146.m003502 Auxin-responsive protein IAA6, putative 56 4e-08
30076.m004546 Auxin-responsive protein IAA20, putative 52 5e-07
29883.m001992 Auxin-induced protein 22E, putative 51 1e-06
29927.m000601 hypothetical protein 51 1e-06
>29739.m003713 Auxin response factor, putative
Length = 1119
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/370 (93%), Positives = 359/370 (97%), Gaps = 2/370 (0%)
Query: 178 FSTAALMQSQSFPVSQHHALQKSPTI-RAHSTLTDGDAPSCSTSPSTNNCQIAPSNFLNR 236
FSTAALMQSQSFPVSQ LQKSPTI R HSTLTDGDAPSCSTSPSTNNCQI+PSNFLNR
Sbjct: 751 FSTAALMQSQSFPVSQPQGLQKSPTIIRPHSTLTDGDAPSCSTSPSTNNCQISPSNFLNR 810
Query: 237 NQQAPAILMGDSVIEPATNLVQELNNKSDIRVKHEFPGSKASDQLKYKGTITDQLEASSS 296
NQQAPA++M DSV+EPATNLVQELN KSDIRVKHEFPGSK +DQLKYKGT+TDQLEASSS
Sbjct: 811 NQQAPALMMSDSVVEPATNLVQELNGKSDIRVKHEFPGSKGADQLKYKGTMTDQLEASSS 870
Query: 297 GTSYCLDAGNIQQNFSLPTFGLDGDVQSHPRNSLPFATNIESLAPDTLLTRGYDSQKDLQ 356
GTSYCLDAGNIQQNFS+PTFGLD DVQSHPRNSLPFA NI+SLAPDTLL+RGYDSQKDLQ
Sbjct: 871 GTSYCLDAGNIQQNFSIPTFGLD-DVQSHPRNSLPFANNIDSLAPDTLLSRGYDSQKDLQ 929
Query: 357 NLLANYGGTPRDIETELSTAAISSQSFGVPIMPFKPGCSNDVAINDSGVLNGGLWANQTQ 416
NLL+NYGGTPRDIETELSTAAISSQSFGVP +PFKPGCSNDVAINDSGVLNGGLWANQTQ
Sbjct: 930 NLLSNYGGTPRDIETELSTAAISSQSFGVPNIPFKPGCSNDVAINDSGVLNGGLWANQTQ 989
Query: 417 RMRTYTKVQKRGSVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHEN 476
RMRTYTKVQKRGSVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHEN
Sbjct: 990 RMRTYTKVQKRGSVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHEN 1049
Query: 477 DILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGSMPVPNQACSGTDSGNAWRGHY 536
DILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGS+PVPNQACSGTDSGNAWRGHY
Sbjct: 1050 DILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGSVPVPNQACSGTDSGNAWRGHY 1109
Query: 537 DDNSAASFNR 546
DDNSAASFNR
Sbjct: 1110 DDNSAASFNR 1119
>30185.m000956 Auxin response factor, putative
Length = 1109
Score = 258 bits (659), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 170/357 (47%), Positives = 219/357 (61%), Gaps = 42/357 (11%)
Query: 213 DAPSCSTSPSTNN----CQIAPSNFLNRN-------QQAPAILMGDSVIEPAT---NLVQ 258
+ PSCSTSPSTNN Q S+ +++ Q+ A L+ +EP + N+++
Sbjct: 757 EVPSCSTSPSTNNFANAVQPMMSSLAHQSTTLGEDMAQSAATLLSPGALEPISCNANIIK 816
Query: 259 ELNNKSDIR-----VKHEFPGSKASDQLKYKGTI-TDQLEASSSGTSYCLDAGNIQQNFS 312
++ KSDI+ KH+ G T+ TD L+ SSS TS C+ N + +
Sbjct: 817 DIQQKSDIKPSLNMTKHQNQGFFTPQTYLNAATVQTDFLDTSSSTTSVCVSQNNNSSSCN 876
Query: 313 LPTFGL-----DGDVQSHPRNSLPFATNI-----ESLAPDTLLTRGYDSQ-KDLQNLLAN 361
+ L DG++ + PRN++P+ +N+ SL D LT+G KD N L++
Sbjct: 877 PQSMLLRDTNQDGELPADPRNNVPYGSNVGGQVGVSLNSDHGLTKGIVGLGKDFSNNLSS 936
Query: 362 YG-----GTPRDIETELSTAAISSQSFGVPIMPFKPGCSNDVAINDSGVLNGGLWAN--Q 414
G +D + ELS++ +S QSFGVP M F S D INDS +N G WA Q
Sbjct: 937 GGMLANCENAKDPQNELSSSMVS-QSFGVPDMAFN---SIDSTINDSSFMNRGPWAPPPQ 992
Query: 415 TQRMRTYTKVQKRGSVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDH 474
QRMRTYTKV KRG+VGRSID+TRY GY EL+ DLAR FGIEGQLED Q WKLVYVDH
Sbjct: 993 FQRMRTYTKVYKRGAVGRSIDITRYSGYVELKQDLARRFGIEGQLEDRQRIGWKLVYVDH 1052
Query: 475 ENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGSMPVPNQACSGTDSGNA 531
END+LLVGDDPWEEFV+CV+ IKILS EVQQMSLDGD G+ +PNQACS +D+GNA
Sbjct: 1053 ENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNSGLPNQACSSSDNGNA 1109
>30170.m014161 Auxin response factor, putative
Length = 950
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 105/150 (70%), Gaps = 3/150 (2%)
Query: 365 TPRDIETELSTAAIS-SQSFGVPIMPFKPG--CSNDVAINDSGVLNGGLWANQTQRMRTY 421
T +D+++++++ +++ SQ+F P G S++V + + W R+RTY
Sbjct: 779 TSQDVQSQITSVSLADSQAFSQQDFPDSSGGTSSSNVDFDKGNYMQNNSWQQVAPRVRTY 838
Query: 422 TKVQKRGSVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHENDILLV 481
TKVQK GSVGRSIDV+ +K Y+EL + MFG+EG L +P+ S WKLVYVD+END+LL+
Sbjct: 839 TKVQKAGSVGRSIDVSGFKNYEELCSAIECMFGLEGLLNNPRESGWKLVYVDYENDVLLI 898
Query: 482 GDDPWEEFVSCVQSIKILSSAEVQQMSLDG 511
GDDPWEEFV CV+ I+ILS +EVQQMS +G
Sbjct: 899 GDDPWEEFVGCVRCIRILSPSEVQQMSEEG 928
>29769.m000463 Auxin response factor, putative
Length = 826
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 57/93 (61%), Positives = 73/93 (78%)
Query: 419 RTYTKVQKRGSVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHENDI 478
RT+ KV K GSVGRS+D++R+ Y ELR +LA+MFGIEG+LE+P S W+LV+VD END+
Sbjct: 725 RTFVKVYKLGSVGRSLDISRFSSYHELREELAQMFGIEGKLENPHRSGWQLVFVDRENDV 784
Query: 479 LLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDG 511
LL+GDDPWE FV+ V IKILS +VQ+M G
Sbjct: 785 LLLGDDPWEAFVNNVWYIKILSPEDVQKMGEQG 817
>30111.m000734 Auxin response factor, putative
Length = 810
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Query: 419 RTYTKVQKRGS-VGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHEND 477
R+ TKV K+GS VGR+ID++R GY +L +L R+F +EG L+DP W+++Y D END
Sbjct: 666 RSCTKVHKQGSLVGRAIDLSRLNGYSDLLSELERLFSMEGLLQDPNKG-WRILYTDSEND 724
Query: 478 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMSL 509
+++VGDDPW EF + V I I + EV++M++
Sbjct: 725 VMVVGDDPWHEFCNVVSKIHIYTQEEVEKMTI 756
>29609.m000587 Auxin response factor, putative
Length = 671
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 70/96 (72%), Gaps = 2/96 (2%)
Query: 414 QTQRMRTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYV 472
Q++++R+ TKV +G +VGR++D+TR++ Y++L L MF IEG+L S W++VY
Sbjct: 540 QSRQIRSCTKVHMQGIAVGRAVDLTRFECYEDLLRKLEEMFDIEGELSG-FSKKWQVVYT 598
Query: 473 DHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 508
D E+D+++VGDDPW EF S V+ I I +S EV+++S
Sbjct: 599 DDEDDMMMVGDDPWHEFCSMVRKIFIYTSEEVKRLS 634
>30147.m014418 Auxin response factor, putative
Length = 844
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
Query: 414 QTQRMRTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYV 472
QT R+ TKV K+G ++GRS+D+ ++ YDEL +L R+F G+L P+ +W +VY
Sbjct: 713 QTGSTRSCTKVHKQGIALGRSVDLAKFNNYDELIAELDRLFEFGGELISPKK-NWLIVYT 771
Query: 473 DHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQM 507
D E D++LVGDDPW+EFV V+ I I + EVQ+M
Sbjct: 772 DDEGDMMLVGDDPWQEFVGMVRKIFIYTREEVQKM 806
>30068.m002516 hypothetical protein
Length = 694
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 63/90 (70%), Gaps = 3/90 (3%)
Query: 419 RTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHEND 477
R+ TKVQ +G +VGR+ID+T KGY++L +L MF I+GQL W++VY D E D
Sbjct: 582 RSRTKVQMQGVAVGRAIDLTMIKGYNQLLDELEEMFDIKGQLHP--RDKWEIVYTDDEGD 639
Query: 478 ILLVGDDPWEEFVSCVQSIKILSSAEVQQM 507
++LVGDDPW EF + V+ I I SS +V++M
Sbjct: 640 MMLVGDDPWPEFCNMVRRIFICSSQDVKKM 669
>29742.m001397 Auxin response factor, putative
Length = 667
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 61/94 (64%), Gaps = 3/94 (3%)
Query: 415 TQRMRTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVD 473
T RT TKVQ +G +VGR++D+T KGY +L +L +F I+G+L + W +V+ D
Sbjct: 548 TTSTRTRTKVQMQGVAVGRAVDLTALKGYGDLIKELEELFEIKGELSTREK--WAVVFTD 605
Query: 474 HENDILLVGDDPWEEFVSCVQSIKILSSAEVQQM 507
E D++LVGDDPW EF V+ I I SS E +++
Sbjct: 606 DEGDMMLVGDDPWREFCKMVRKILIYSSEEAKKL 639
>30128.m008545 transcription factor, putative
Length = 787
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 6/116 (5%)
Query: 394 CSNDVAINDSGVLNGGLWANQTQRMRTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARM 452
C + S + G L T+ KV K+G +VGR +D+T++ GY+EL +L R+
Sbjct: 653 CEEEKLFMASHFIEGKLQNGSTR----CVKVHKQGIAVGRYVDLTKFNGYNELIAELDRI 708
Query: 453 FGIEGQLEDPQSSDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 508
F G+L + +W + + D E D++LVGDDPWEEF S V+ I + + E+ +M+
Sbjct: 709 FEFSGELIT-SNKNWLIAFTDDEGDMMLVGDDPWEEFCSMVRRIFVYTREEINRMN 763
>29841.m002748 Auxin-induced protein AUX22, putative
Length = 194
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 413 NQTQRMRT---YTKVQKRGS-VGRSIDVTRYKGYDELRHDLARMFGIEG---QLEDPQSS 465
N+ +R+ T Y KV G+ R ID+ +K Y +L L ++FG G L+D SS
Sbjct: 76 NEKERLETSKLYVKVSMDGAPFLRKIDLGTHKEYSDLVLALEKLFGCFGIGKALKDADSS 135
Query: 466 DWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSL 509
D+ +Y D + D +LVGD PWE F + ++I+ +E + L
Sbjct: 136 DYVPIYEDKDGDWMLVGDVPWEMFTESCKRLRIMKRSEAKCFGL 179
>29647.m002032 transcription factor, putative
Length = 634
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 422 TKVQKRGSVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHENDILL 480
TKV K GS GRS+D+T++ GYD+L +L +MF +G L D SS W++ Y D E DI+L
Sbjct: 553 TKVLKHGSAGRSVDITKFDGYDKLIRELDQMFDFKGTLID-GSSGWEVTY-DDEGDIML 609
>29609.m000586 Auxin response factor, putative
Length = 620
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 416 QRMRTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDH 474
+++ + +V+ +G ++GRSID+T++K +++L +L MF IEG+L + W +VY D
Sbjct: 534 KQITSCAEVRMQGIALGRSIDLTKFKCHEDLIKELENMFEIEGELSG-STKKWLIVYTDA 592
Query: 475 ENDILLVGDDPWEEFVSCVQSIKI 498
++++ LVGD WE + V+ I I
Sbjct: 593 DSEMKLVGDYQWEVVCNMVKKILI 616
>29848.m004617 ATP binding protein, putative
Length = 895
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 13/125 (10%)
Query: 391 KPGCSNDVAI-----NDSGVLNGGLWANQTQRMRTYTKVQKRG-SVGRSIDVTRYKGYDE 444
+P N VA N++ +NGG Y KV+ G ++ R ID+ + Y
Sbjct: 120 RPTVKNRVAAAASAGNENNQMNGG-------SNYKYVKVKMEGVAIARKIDLRLFHSYQT 172
Query: 445 LRHDLARMFGIEGQLEDPQSSDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEV 504
L + L MFG + +D ++++ L Y D + D LL GD PW+ F+ VQ ++++ + +
Sbjct: 173 LTNFLISMFGKCEKGDDDSTTNYTLTYQDKDGDWLLAGDVPWQTFMESVQRLELVRNGGL 232
Query: 505 QQMSL 509
+ SL
Sbjct: 233 PRPSL 237
>29844.m003175 Auxin-responsive protein IAA4, putative
Length = 191
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 421 YTKVQKRGS-VGRSIDVTRYKGYDELRHDLARMF----GIEGQLEDPQSSDWKLVYVDHE 475
Y KV G+ R ID+ YKGY EL L MF G + E + S++ Y D +
Sbjct: 96 YVKVSMDGAPYLRKIDLKVYKGYKELLKALQSMFKFTIGEYSEREGYKGSEYAPTYEDKD 155
Query: 476 NDILLVGDDPWEEFVSCVQSIKILSSAEVQQM 507
D +LVGD PW+ F+S + ++I+ +E + +
Sbjct: 156 GDWMLVGDVPWDMFMSSCKRLRIMKGSEARGL 187
>30146.m003502 Auxin-responsive protein IAA6, putative
Length = 320
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 22/99 (22%)
Query: 430 VGRSIDVTRYKGYDELRHDLARMF--------------------GIEGQLEDPQSSDWKL 469
+GR +D+ Y Y++L + +F I G L+ S ++ L
Sbjct: 222 IGRKVDLQAYDSYEKLSIAVDELFRGLLAAQRDSSAGTKQEEEKAITGVLDG--SGEYTL 279
Query: 470 VYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 508
VY D+E D +LVGD PW FVS V+ +++L S+EV +S
Sbjct: 280 VYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEVSALS 318
>30076.m004546 Auxin-responsive protein IAA20, putative
Length = 175
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 413 NQTQRMRTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWK--- 468
N+ Y KV G +GR +D+ + GY +L L MF + +++
Sbjct: 80 NECNSATFYVKVYMEGIPIGRKLDLLAHDGYHDLIATLDHMFSTNILWAEMDCENFEQCH 139
Query: 469 -LVYVDHENDILLVGDDPWEEFVSCVQSIKI 498
L Y D E D L+VGD PWE F+S V+ +KI
Sbjct: 140 VLTYEDKEGDWLIVGDVPWEMFLSSVKRLKI 170
>29883.m001992 Auxin-induced protein 22E, putative
Length = 196
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 421 YTKVQKRGS-VGRSIDVTRYKGYDELRHDLARMFGIE----GQLEDPQSSDWKLVYVDHE 475
Y KV G+ R ID+ Y Y EL L MF ++ + E SD+ Y D +
Sbjct: 102 YVKVSVDGAPYLRKIDIKVYNSYPELLKALENMFKLKIGEYSEREGYNGSDYAPTYEDKD 161
Query: 476 NDILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 508
D +LVGD PW F+S + ++I+ +E + +S
Sbjct: 162 GDWMLVGDVPWGMFISSCKRLRIVKGSEGRGLS 194
>29927.m000601 hypothetical protein
Length = 250
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 417 RMRTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHE 475
R +Y KV+ G ++ R ID + Y + +L+ L MFG + S+ ++L Y D E
Sbjct: 162 RPSSYVKVKMDGVAIARKIDPSLYTSFQDLKDTLLLMFGTCQE----NSTTYRLAYQDRE 217
Query: 476 NDILLVGDDPWEEFVSCVQSIKILSS 501
D LL D W F+ VQ +K++ +
Sbjct: 218 GDWLLADDVSWRSFIGSVQRLKLMKN 243