Jatropha Genome Database

JcCB0152261.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0152261.10 - phase: 0 /partial
         (174 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m006983 conserved hypothetical protein                          182   5e-47

>30131.m006983 conserved hypothetical protein
          Length = 746

 Score =  182 bits (463), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 94/144 (65%), Positives = 109/144 (75%)

Query: 31  SAHSMPGLSSIGRSFCDDSPKFSMDDFEALGXXXXXXXXXXXXXXXXVVGERLLFSNVTR 90
           +AH    LS  G SF +DSPKFSMDDFEALG                VVGE++LFSNVTR
Sbjct: 603 AAHPDSILSGSGHSFLNDSPKFSMDDFEALGSSTAMPSSPPMSSSPPVVGEKILFSNVTR 662

Query: 91  LGFAAGHGSPALRTEETSALHNNKVTNDSSSVSGTKNSGTPSFANVISRVKSGEALDAPK 150
           LGFAAGH SP L+ EETSALH+NKVTNDS+ VSGT+N+GTP+FAN+ SR+ SGE L+  K
Sbjct: 663 LGFAAGHDSPTLKIEETSALHSNKVTNDSTGVSGTRNTGTPTFANITSRMNSGENLNVSK 722

Query: 151 TNEIGKKGKKSSRVLLSTAGGRRY 174
            NEIGKKGKK +RVL+STAGGRRY
Sbjct: 723 MNEIGKKGKKQNRVLMSTAGGRRY 746