Jatropha Genome Database

JcCB0143731.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0143731.10 + phase: 0 /pseudo
         (271 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29758.m000647 cdp-diacylglycerol--glycerol-3-phosphate 3-phospha...   159   2e-39
29842.m003620 cdp-diacylglycerol--glycerol-3-phosphate 3-phospha...    57   6e-09

>29758.m000647 cdp-diacylglycerol--glycerol-3-phosphate
           3-phosphatidyltransferase, putative
          Length = 359

 Score =  159 bits (401), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/124 (75%), Positives = 102/124 (82%), Gaps = 12/124 (9%)

Query: 126 LVADMGSDDKVEDVDWYQN---HHLNGPNKQPPPSSQNHHKQEDSRSKLLTLPTILTLGR 182
           LVADMGS+ K++ VD        HLNG         QNH +Q+DS SKLLTLPTILTLGR
Sbjct: 125 LVADMGSESKIDTVDNNNINNNSHLNG---------QNHKQQQDSYSKLLTLPTILTLGR 175

Query: 183 VAAVPLLVSTFYLDSWWGRTATTSIFIAAAVTDWLDGYLARKMRLGSAFGAFLDPVADKV 242
           VAAVPLLVSTFY+DSWWGRTATTSIFIAAAVTDWLDGYLARKMRLGSAFGAFLDPVADK+
Sbjct: 176 VAAVPLLVSTFYVDSWWGRTATTSIFIAAAVTDWLDGYLARKMRLGSAFGAFLDPVADKL 235

Query: 243 CVSS 246
            V++
Sbjct: 236 MVAA 239


>29842.m003620 cdp-diacylglycerol--glycerol-3-phosphate
           3-phosphatidyltransferase, putative
          Length = 334

 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 3/85 (3%)

Query: 162 HKQEDSRSKLLTLPTILTLGRVAAVPLLVSTFYLDSWWGRTATTSIFIAAAVTDWLDGYL 221
           H  E      + LP  ++  R+ + P++   + + +    +A   + I+ A TDWLDG++
Sbjct: 125 HLDEGLWKSFINLPNFVSFTRLVSGPVI--GWMITNEMYSSAFVGLAISGA-TDWLDGFI 181

Query: 222 ARKMRLGSAFGAFLDPVADKVCVSS 246
           ARKMR+ S  G++LDP+ADKV + S
Sbjct: 182 ARKMRINSVVGSYLDPLADKVLIGS 206