Jatropha Genome Database

JcCB0143591.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0143591.10 - phase: 0 /partial
         (230 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29713.m000177 acyl-CoA oxidase, putative                              324   2e-89
29646.m001117 acyl-CoA oxidase, putative                               71   5e-13

>29713.m000177 acyl-CoA oxidase, putative
          Length = 252

 Score =  324 bits (831), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 154/203 (75%), Positives = 180/203 (88%), Gaps = 9/203 (4%)

Query: 2   KRNFPTQL-------MEPKDPNPTAEDETQIVVSRRIQRLSFHLTPIPCSLYDSNQLGMV 54
           +RNFPT L       M+P++ N T+EDETQIV SRRIQRLSFHL+PI  SL++SNQLGM+
Sbjct: 2   RRNFPTLLLHRYQIKMKPRNQNSTSEDETQIV-SRRIQRLSFHLSPIGRSLHESNQLGMM 60

Query: 55  ECAKAAKLVVNTDKLSLYMRGKHREIQEKVFAYFNSRPELQTPVEIAKDDYRELCWRQLL 114
            CA+  K+ VN +KLSLYMRGKHREIQEKVFAYF SRPELQTPVEI+++++RELCWRQLL
Sbjct: 61  PCART-KVEVNKEKLSLYMRGKHREIQEKVFAYFKSRPELQTPVEISRNEHRELCWRQLL 119

Query: 115 GLVREAGIRPFRYVADDPVKYFAILEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRE 174
           GLVREAGIRP +Y+++DP  YFAILEA GSVD+SLGIKMGVQYSLWGGS+IN+GTKKHR+
Sbjct: 120 GLVREAGIRPLKYISEDPAIYFAILEAAGSVDISLGIKMGVQYSLWGGSIINIGTKKHRD 179

Query: 175 KYFDGIDNLEYPGCFAMTELHHG 197
           KYFDGIDNL+YPGCFAMTELHHG
Sbjct: 180 KYFDGIDNLDYPGCFAMTELHHG 202


>29646.m001117 acyl-CoA oxidase, putative
          Length = 625

 Score = 70.9 bits (172), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%)

Query: 130 DDPVKYFAILEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHREKYFDGIDNLEYPGCF 189
           +  +K FA LE  G  D SL +K+GV + LWGG++   GTK+H +K+    +     GCF
Sbjct: 75  ESEMKKFAFLEVTGIFDHSLSVKLGVHFFLWGGAIQFFGTKRHHDKWLRNTETYALKGCF 134

Query: 190 AMTELHHG 197
           AM+EL HG
Sbjct: 135 AMSELGHG 142