Jatropha Genome Database

JcCB0143221.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0143221.10 + phase: 0 /pseudo/partial
         (365 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30138.m004052 heat shock protein binding protein, putative            360   e-100

>30138.m004052 heat shock protein binding protein, putative
          Length = 682

 Score =  360 bits (925), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 181/265 (68%), Positives = 202/265 (76%), Gaps = 2/265 (0%)

Query: 101 KVGELLSSDGK-XXXXXXXXXXXXATALKNKRLTFAWLDGEAQEKYCLFYLHSETSYDTC 159
           +V ELL +DG+             ATALKNKRLTFAWLDGEAQ+KYCLFYLHSETSYDTC
Sbjct: 418 RVEELLLNDGEPSVVDKDQSSSLLATALKNKRLTFAWLDGEAQQKYCLFYLHSETSYDTC 477

Query: 160 GPRRDLSDVPRLFIVRYKRNTTQDNVRGKRNAFDDEDADPASQLVARYNGSDETPQIARW 219
           GPRRD+ DVPRLFIVRYKRN TQDNVR K+N  + EDAD ASQLVARYNGSDE PQI RW
Sbjct: 478 GPRRDMVDVPRLFIVRYKRNATQDNVRVKKNILEYEDADSASQLVARYNGSDEIPQIIRW 537

Query: 220 IAETISDGETRDLPFFKIKAPDLVPEDSDPIWSRGAQNILYKSVGVKHWIYRIKSRIYDH 279
           I+ET+ DGETRDLPFFK K PDLVPEDSDPIWSRGAQNIL  SVG+KH I  I SRI D+
Sbjct: 538 ISETMRDGETRDLPFFKAKTPDLVPEDSDPIWSRGAQNILSGSVGIKHRIRGIISRICDY 597

Query: 280 MGDPRIGPILLLGALMSFGAVWLMRSQPAHRGQSSQPSESGXXXXXXXXXXXXXXXXXXX 339
           +GDPRIGPILL+G+LMSFG VWLMR+Q  H+ +SSQ  ES                    
Sbjct: 598 IGDPRIGPILLVGSLMSFGTVWLMRNQATHQSRSSQARESS-LKDENTRKRRERRRNASK 656

Query: 340 XXXPPSISDIEPKDAYQMPMSDSDS 364
              PPSI+D+EPKDAYQMP+SDSD+
Sbjct: 657 KDIPPSITDMEPKDAYQMPLSDSDA 681