Jatropha Genome Database

JcCB0142901.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0142901.10 + phase: 0 /pseudo/partial
         (355 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013992 metalloendopeptidase, putative                          410   e-115

>30170.m013992 metalloendopeptidase, putative
          Length = 844

 Score =  410 bits (1054), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 198/222 (89%), Positives = 202/222 (90%), Gaps = 16/222 (7%)

Query: 150 IHEVMHVLGFDPHAFAHFRDDRKRRRGQVTEQVMDEKLGRMVTRVVLPRVVMHSRHHYGA 209
           IHEVMHVLGFDPHAFAHFRD+RKRRRGQVTEQVMDEKLGRMVTRVVLPRVVMHSRHHYGA
Sbjct: 281 IHEVMHVLGFDPHAFAHFRDERKRRRGQVTEQVMDEKLGRMVTRVVLPRVVMHSRHHYGA 340

Query: 210 FSENFTGLELEDGG----EGAH------------QSVDTRSVVSKMTLALLEDSGWYQAN 253
           FSENFTGLELEDGG     G+H             SVDTRSVVSKMTLALLEDSGWYQAN
Sbjct: 341 FSENFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYQAN 400

Query: 254 YSMADRLDWGRNQGTDFVTLPCNLWKGAYHCNTTQLSGCTYNREAEGYCPIVSYTGDLPQ 313
           YSMADRLDWGRNQGT+FVT PCNLW GAYHCNTTQLSGCTYNREAEGYCPIVSY+GDLPQ
Sbjct: 401 YSMADRLDWGRNQGTEFVTSPCNLWNGAYHCNTTQLSGCTYNREAEGYCPIVSYSGDLPQ 460

Query: 314 WARYFPQPNKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDR 355
           WARYFPQPNKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDR
Sbjct: 461 WARYFPQPNKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDR 502