Jatropha Genome Database

JcCB0141621.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0141621.10 + phase: 0 /pseudo/partial
         (250 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29631.m001022 nucleoredoxin, putative                                 318   2e-87
29631.m001021 nucleoredoxin, putative                                 217   3e-57
30170.m014281 nucleoredoxin, putative                                 137   6e-33
33278.m000017 conserved hypothetical protein                           51   4e-07

>29631.m001022 nucleoredoxin, putative
          Length = 575

 Score =  318 bits (814), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 152/191 (79%), Positives = 167/191 (87%)

Query: 1   MAEMANGDSHDFRSLLSSSDCDYLIRNNGDQVKIDSLKGKKIGLYFSASWCGPCQRFTPV 60
           MAEM NGD HDF SLLSSSD DYLIRNNGDQV+IDSLKGKK+GLYFSASWCGPCQRFTP 
Sbjct: 1   MAEMVNGDYHDFVSLLSSSDRDYLIRNNGDQVEIDSLKGKKLGLYFSASWCGPCQRFTPT 60

Query: 61  LVEAYNELAPKGNFEIVFISADEDDESFKKYFSKMPWLAIPFSESETRDRLDQLFKIQGI 120
           LVE YNELAPKG+FEIVFI+ADEDDESF++YFSKMPWLAIPFS+S+ RDRLD++FK+QGI
Sbjct: 61  LVEVYNELAPKGDFEIVFITADEDDESFEEYFSKMPWLAIPFSDSDKRDRLDEIFKVQGI 120

Query: 121 PHLVIIDENGKVSSESGVEIIREYGVEAYPFTPXXXXXXXXXXXXARRNQSLRSILVVHS 180
           PH VI+DENGKVSSESGVEII+EYGV+ YPFT             ARRNQSLRSILV  S
Sbjct: 121 PHFVILDENGKVSSESGVEIIQEYGVQCYPFTAERIKVLKGQEEEARRNQSLRSILVFGS 180

Query: 181 RDYVISSDGKK 191
           RDYVI+SDGKK
Sbjct: 181 RDYVIASDGKK 191



 Score =  139 bits (351), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 108/184 (58%), Gaps = 2/184 (1%)

Query: 9   SHDFRSLLSSSDCDYLIRNNGDQVKIDSLKGKKIGLYFSASWCGPCQRFTPVLVEAYNEL 68
           +   RS+L     DY+I ++G +V +  L+GK +GLYFS S    C  FT  L E Y +L
Sbjct: 169 NQSLRSILVFGSRDYVIASDGKKVSVSELEGKTVGLYFSLSSYTSCVDFTSTLAEVYEKL 228

Query: 69  APKG-NFEIVFISADEDDESFKKYFSKMPWLAIPFSESETRDRLDQLFKIQGIPHLVIID 127
             KG NFEIVFIS D+++E+F++  + MPWLA PF++    ++L + F++  +P LV+I 
Sbjct: 229 KAKGENFEIVFISLDDEEETFQQSLANMPWLAFPFNDKGC-EKLVRYFELSTVPTLVVIG 287

Query: 128 ENGKVSSESGVEIIREYGVEAYPFTPXXXXXXXXXXXXARRNQSLRSILVVHSRDYVISS 187
            +GK    +  E I E+GV+AYPFTP                Q+L S+LV   +++VI  
Sbjct: 288 PDGKTLHSNVAEAIEEHGVQAYPFTPEKFAELAEMEKAREAAQTLESVLVSGDQNFVIGR 347

Query: 188 DGKK 191
           DG K
Sbjct: 348 DGAK 351



 Score =  127 bits (318), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 64/155 (41%), Positives = 97/155 (62%), Gaps = 4/155 (2%)

Query: 1   MAEM--ANGDSHDFRSLLSSSDCDYLIRNNGDQVKIDSLKGKKIGLYFSASWCGPCQRFT 58
           +AEM  A   +    S+L S D +++I  +G ++ +  L GK I LYFSA WC PC+ F 
Sbjct: 319 LAEMEKAREAAQTLESVLVSGDQNFVIGRDGAKIPVTDLVGKNILLYFSAHWCPPCRAFL 378

Query: 59  PVLVEAYNELAPKGN-FEIVFISADEDDESFKKYFSKMPWLAIPFSESETRDRLDQLFKI 117
           P LVEAY+E+  K + FE++FIS+D D  SF ++FS MPWLA+PF +   +  L + FK+
Sbjct: 379 PKLVEAYHEIKTKDDAFEVIFISSDRDQASFDEFFSGMPWLALPFGDVR-KASLSRKFKV 437

Query: 118 QGIPHLVIIDENGKVSSESGVEIIREYGVEAYPFT 152
           QGIP L+ +   G+  ++    ++  +G +AY FT
Sbjct: 438 QGIPMLIALGPTGRTITKEARSLVTLHGADAYLFT 472


>29631.m001021 nucleoredoxin, putative
          Length = 553

 Score =  217 bits (553), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 103/169 (60%), Positives = 125/169 (73%)

Query: 23  YLIRNNGDQVKIDSLKGKKIGLYFSASWCGPCQRFTPVLVEAYNELAPKGNFEIVFISAD 82
           +LIR+NGDQVKI +L GK +GLYFS SWCGPC+ FTP LV+ Y EL+ KG+FE+VFIS+D
Sbjct: 24  FLIRSNGDQVKISNLVGKIVGLYFSGSWCGPCRHFTPNLVQVYEELSLKGDFEVVFISSD 83

Query: 83  EDDESFKKYFSKMPWLAIPFSESETRDRLDQLFKIQGIPHLVIIDENGKVSSESGVEIIR 142
            D ESF  YFSKMPWLAIPFS+ ET   L  LFK++GIP+LV +D +GKVS + GV  IR
Sbjct: 84  RDAESFDAYFSKMPWLAIPFSDQETCKHLKDLFKVRGIPNLVFLDADGKVSCDQGVRFIR 143

Query: 143 EYGVEAYPFTPXXXXXXXXXXXXARRNQSLRSILVVHSRDYVISSDGKK 191
           EYG E YPFTP            A++NQ+L SILV  SRD++IS DG K
Sbjct: 144 EYGAEGYPFTPERVEYFRQEEENAKKNQTLSSILVSSSRDFLISKDGTK 192



 Score =  139 bits (350), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 107/179 (59%), Gaps = 2/179 (1%)

Query: 14  SLLSSSDCDYLIRNNGDQVKIDSLKGKKIGLYFSASWCGPCQRFTPVLVEAYNELAPKG- 72
           S+L SS  D+LI  +G ++ +  L+GK +GLYFS      C  FTP L E Y +L  KG 
Sbjct: 175 SILVSSSRDFLISKDGTKIPVSELEGKMVGLYFSVHSHRLCLDFTPRLEEVYKKLKEKGE 234

Query: 73  NFEIVFISADEDDESFKKYFSKMPWLAIPFSESETRDRLDQLFKIQGIPHLVIIDENGKV 132
            FE+V IS D D+ +FK+    MPWLA+PF E ++R+RL + F++  +P LVII E+GK 
Sbjct: 235 KFEVVLISMDYDENNFKQGLETMPWLALPF-EDKSRERLARYFELSALPTLVIIGEDGKT 293

Query: 133 SSESGVEIIREYGVEAYPFTPXXXXXXXXXXXXARRNQSLRSILVVHSRDYVISSDGKK 191
            +++  E+I  +G++AYPFTP                Q+L S+LV   +D+VI   G K
Sbjct: 294 LNKNVAELIEGHGIQAYPFTPEKLVELAEIEKARLEAQTLESVLVHGDKDFVIEESGSK 352



 Score =  134 bits (338), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 66/151 (43%), Positives = 95/151 (62%), Gaps = 2/151 (1%)

Query: 3   EMANGDSHDFRSLLSSSDCDYLIRNNGDQVKIDSLKGKKIGLYFSASWCGPCQRFTPVLV 62
           E A  ++    S+L   D D++I  +G +V +  L GK I LYFSA WC PC+ F P L+
Sbjct: 324 EKARLEAQTLESVLVHGDKDFVIEESGSKVPVSELVGKNILLYFSAKWCPPCRAFLPKLI 383

Query: 63  EAYNELAPKGN-FEIVFISADEDDESFKKYFSKMPWLAIPFSESETRDRLDQLFKIQGIP 121
           EAY+E+  K N FEI+FIS+D D  SF +++++MPWLA+PF + + +  L + FKI+GIP
Sbjct: 384 EAYHEIKAKDNAFEIIFISSDRDQSSFDEFYTEMPWLALPFGD-DRKTILQRKFKIKGIP 442

Query: 122 HLVIIDENGKVSSESGVEIIREYGVEAYPFT 152
             + I   GK  ++   E I  YG +AYPF 
Sbjct: 443 AAIAISPTGKTLTKEAREHITAYGADAYPFN 473


>30170.m014281 nucleoredoxin, putative
          Length = 389

 Score =  137 bits (344), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 102/165 (61%), Gaps = 4/165 (2%)

Query: 31  QVKIDSLKGKKIGLYFSASWCGPCQRFTPVLVEAYNELAPKG-NFEIVFISADEDDESFK 89
           +VK+  L+GK IGLYFSA+W  PC+ F  VL   Y +L   G NFE+VF+S+DE+ ++F 
Sbjct: 16  KVKVSELEGKVIGLYFSANWYPPCRNFNQVLAGVYEQLKENGSNFEVVFVSSDENLDAFN 75

Query: 90  KYFSKMPWLAIPFSESETRDRLDQLFKIQGIPHLVII---DENGKVSSESGVEIIREYGV 146
            Y + MPWL+IPFS+ ET+  LD+ F I+G+P LVI+   D+  + +   GV+++  +GV
Sbjct: 76  NYRALMPWLSIPFSDLETKKALDRKFNIEGVPCLVILQPKDDKEEATLHDGVDLLYRFGV 135

Query: 147 EAYPFTPXXXXXXXXXXXXARRNQSLRSILVVHSRDYVISSDGKK 191
           +A+PFT                +Q+L ++L  H RDY+ +    K
Sbjct: 136 QAFPFTKERLEELKMQEKEKHESQTLTNLLTNHDRDYLFAHPAPK 180



 Score =  129 bits (324), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 69/159 (43%), Positives = 93/159 (58%), Gaps = 8/159 (5%)

Query: 1   MAEMANGDSHDFRSLLSSSDCDYLIRNNG-DQVKIDSLKGKKIGLYFSASWCGPCQRFTP 59
           M E    +S    +LL++ D DYL  +    QV + SL GK IGL+FSA WC P  +FTP
Sbjct: 150 MQEKEKHESQTLTNLLTNHDRDYLFAHPAPKQVPVASLIGKTIGLFFSAQWCRPGMKFTP 209

Query: 60  VLVEAYNELAP------KGNFEIVFISADEDDESFKKYFSKMPWLAIPFSESETRDRLDQ 113
            L+  Y+++          +FEIVF+S D D E F  YF+ MPWLA+PF +  T   L +
Sbjct: 210 KLISIYHKIKQMLRERESEDFEIVFVSTDRDQEGFDSYFNTMPWLALPFGDP-TIKTLTK 268

Query: 114 LFKIQGIPHLVIIDENGKVSSESGVEIIREYGVEAYPFT 152
            F +QGIP L+II  NGK  +++G  +I  Y   AYPFT
Sbjct: 269 YFDVQGIPCLIIIGPNGKTITKNGRNLINLYQENAYPFT 307


>33278.m000017 conserved hypothetical protein
          Length = 443

 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 5/102 (4%)

Query: 32  VKIDSLKGKKIGLYFSASWCGPCQRFTPVLVEAYNELAPKGNFEIVFISADEDDESFKKY 91
           V++   +GK + + F ASWCGPC++  P + E   +   +G  ++V ++ D   +  +++
Sbjct: 319 VQLAKYQGKVVYVDFWASWCGPCRQSFPWMNEMQAKYGARG-LQVVGVNLDAKTDDARRF 377

Query: 92  FSKMPW-LAIPFSESETRDRLDQLFKIQGIPHLVIIDENGKV 132
            ++ P    I F  +    R    + I+G+P  V+I  +GKV
Sbjct: 378 LAETPARFTIAFDPAGATPR---AYGIKGMPSSVLIGPDGKV 416