Jatropha Genome Database

JcCB0139441.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0139441.10 - phase: 0 /partial
         (242 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30146.m003440 conserved hypothetical protein                          303   5e-83
29616.m000214 conserved hypothetical protein                          227   4e-60
29680.m001734 conserved hypothetical protein                          215   2e-56
28842.m000950 conserved hypothetical protein                          211   2e-55
30147.m013908 conserved hypothetical protein                          206   8e-54
27504.m000619 conserved hypothetical protein                          132   2e-31
29794.m003358 conserved hypothetical protein                          101   3e-22
30190.m011172 conserved hypothetical protein                           81   5e-16

>30146.m003440 conserved hypothetical protein
          Length = 361

 Score =  303 bits (776), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 143/243 (58%), Positives = 181/243 (74%), Gaps = 2/243 (0%)

Query: 1   HAQVSADGGNFLGAQARLNVWNPATFGT-EVSSAQIWVVAGRDQGLNFIQAGWKVNKGEK 59
           +AQVS + G + GA A+LNVWNPA     E S +QIWV++G DQ LN I+AGW+V  G+ 
Sbjct: 118 YAQVSLESGYYYGAHAKLNVWNPAKANDGEFSLSQIWVLSGLDQDLNSIEAGWQVFPGDN 177

Query: 60  DTRFYSYWTRDNYQSTGCYNLDCPGFVQTNHRIAFGAAIEPISKYDGPQYSIDITIHKDM 119
             R + YWTRDNY  TGCY+L CPGFVQT+ ++A G  I P+S YDG QY  DI +HKD 
Sbjct: 178 KPRTFIYWTRDNYGQTGCYDLVCPGFVQTSSKLALGTPIRPVSIYDGNQYDRDIAVHKDR 237

Query: 120 KSGNWWLQVHGQEVGYWPPSILTSLANRSTLINWGGLVVNFQYHGRHTSTQMGSGLFPGE 179
           +SGNWWLQ+ GQ++GYWP SI T+LA  +T INWGG +VN+  +GRHTSTQMGSG FP E
Sbjct: 238 ESGNWWLQIRGQDIGYWPSSIFTTLAESATRINWGGEIVNYGLNGRHTSTQMGSGHFPSE 297

Query: 180 GFGKASAFWGLGYIDNLGKMRDPEHLMPYVTKPSCYDLKVGKKN-KDFGVHFYYGGPGFS 238
           G+ KA+  + LGYID+ G +RDP+ L PY+TK SCYDL+ G+    DFGVHFY+GGPG+S
Sbjct: 298 GYKKAAVLFKLGYIDDSGVLRDPDGLEPYITKSSCYDLQFGEMGYDDFGVHFYFGGPGYS 357

Query: 239 PRC 241
            +C
Sbjct: 358 TQC 360


>29616.m000214 conserved hypothetical protein
          Length = 401

 Score =  227 bits (578), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 116/247 (46%), Positives = 163/247 (65%), Gaps = 7/247 (2%)

Query: 1   HAQVSADGGNFLGAQARLNVWNPATFG-TEVSSAQIWVVAGR-DQGLNFIQAGWKVNK-- 56
           HA V  +G N+ GA+A +NVW P      E S +QIW++ G   + LN I+AGW+V+   
Sbjct: 155 HAIVYVEGDNYYGAKATINVWEPKIQQPNEFSLSQIWILGGSFGEDLNSIEAGWQVSPDL 214

Query: 57  -GEKDTRFYSYWTRDNYQSTGCYNLDCPGFVQTNHRIAFGAAIEPISKYDGPQYSIDITI 115
            G+  TR ++YWT D YQ+TGCYNL C GFVQ N++IA GA+I P+S Y   QY I + +
Sbjct: 215 YGDNRTRLFTYWTSDAYQTTGCYNLLCSGFVQINNQIAMGASIYPVSGYGRSQYDISLLV 274

Query: 116 HKDMKSGNWWLQVHGQEV-GYWPPSILTSLANRSTLINWGGLVVNFQYHGRHTSTQMGSG 174
            KD K GNWW+Q     V GYWP S+ + LA+ +T+I WGG VVN +  G+HT+TQMGSG
Sbjct: 275 WKDPKEGNWWIQFGNNYVLGYWPASLFSYLADSATMIEWGGEVVNSELDGQHTTTQMGSG 334

Query: 175 LFPGEGFGKASAFWGLGYIDNLGKMRDPEHLMPYVTKPSCYDLKVGKKNKDFGVHFYYGG 234
            FP EGFGK+  F  +  +D   K+R P+    +  +P+CY++++G  + D+G +F+YGG
Sbjct: 335 HFPEEGFGKSGYFKNIQIVDGSNKLRVPKDTDTFTEQPNCYNVQIG-NDGDWGNYFFYGG 393

Query: 235 PGFSPRC 241
           PG +P C
Sbjct: 394 PGRNPNC 400


>29680.m001734 conserved hypothetical protein
          Length = 439

 Score =  215 bits (547), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 113/236 (47%), Positives = 153/236 (64%), Gaps = 8/236 (3%)

Query: 13  GAQARLNVWNPAT-FGTEVSSAQIWVVAGRDQG--LNFIQAGWKVNK---GEKDTRFYSY 66
           GA+A +NVW+P+     E S +QIW+++G   G  LN I+AGW+V+    G+   R ++Y
Sbjct: 204 GAKATINVWDPSVQVVNEFSLSQIWILSGSFDGSDLNSIEAGWQVSPELYGDSRPRLFTY 263

Query: 67  WTRDNYQSTGCYNLDCPGFVQTNHRIAFGAAIEPISKYDGPQYSIDITIHKDMKSGNWWL 126
           WT D+YQ+TGCYNL C GFVQTN RIA GAAI P+S Y G Q+ I I I KD K GNWW+
Sbjct: 264 WTSDSYQATGCYNLLCAGFVQTNSRIAIGAAISPVSFYGGNQFDITILIWKDPKLGNWWM 323

Query: 127 QV-HGQEVGYWPPSILTSLANRSTLINWGGLVVNFQYHGRHTSTQMGSGLFPGEGFGKAS 185
                  VGYWP  + T LA+ +T++ WGG VVN + +G HTSTQMGSG F  +GFGKAS
Sbjct: 324 GFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGAHTSTQMGSGHFAEDGFGKAS 383

Query: 186 AFWGLGYIDNLGKMRDPEHLMPYVTKPSCYDLKVGKKNKDFGVHFYYGGPGFSPRC 241
            F  L  +D+   +   + +       +CY++K    N ++G +FYYGGPG +P+C
Sbjct: 384 YFRNLEIVDSDNSLTSAQDISILAENTNCYNIK-SSYNNEWGTYFYYGGPGNNPQC 438


>28842.m000950 conserved hypothetical protein
          Length = 412

 Score =  211 bits (537), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 110/247 (44%), Positives = 156/247 (63%), Gaps = 10/247 (4%)

Query: 1   HAQVSADGGNFLGAQARLNVWNPATFG-TEVSSAQIWVVAGR-DQGLNFIQAGWKVNK-- 56
           HA    +G  + GA+A +NVW P      E S +Q+W++ G   + LN I+AGW+V+   
Sbjct: 169 HAIAYVEGDKYYGAKATINVWEPKIQQPNEFSLSQLWILGGSFGEDLNSIEAGWQVSPDL 228

Query: 57  -GEKDTRFYSYWTRDNYQSTGCYNLDCPGFVQTNHRIAFGAAIEPISKYDGPQYSIDITI 115
            G+ +TR ++YWT D YQ+TGCYNL C GF+Q N  IA GA+I P+S Y   QY I I  
Sbjct: 229 YGDNNTRLFTYWTSDAYQATGCYNLLCSGFIQINSEIAMGASISPVSGYRNSQYDISIL- 287

Query: 116 HKDMKSGNWWLQVHGQEV-GYWPPSILTSLANRSTLINWGGLVVNFQYHGRHTSTQMGSG 174
             D K G+WW+Q     V GYWP  + + LA+ +++I WGG VVN +  G+HTSTQMGSG
Sbjct: 288 --DPKEGHWWMQFGNDYVLGYWPSFLFSYLADSASMIEWGGEVVNSEPDGKHTSTQMGSG 345

Query: 175 LFPGEGFGKASAFWGLGYIDNLGKMRDPEHLMPYVTKPSCYDLKVGKKNKDFGVHFYYGG 234
            FP EGFGK+S F  +  +D+   ++ P+ +  +  + +CYD++ G  N D+G +FYYGG
Sbjct: 346 HFPEEGFGKSSYFRNIQVVDDSNNLKAPKGIGTFTEQSNCYDVQTG-SNGDWGHYFYYGG 404

Query: 235 PGFSPRC 241
           PG +  C
Sbjct: 405 PGRNSNC 411


>30147.m013908 conserved hypothetical protein
          Length = 465

 Score =  206 bits (524), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 115/242 (47%), Positives = 155/242 (64%), Gaps = 7/242 (2%)

Query: 1   HAQVSADGGNFLGAQARLNVWNP-ATFGTEVSSAQIWVVAGR-DQGLNFIQAGWKVNK-- 56
           HA V  +G  + GA+A +NVW P  T   E S +QIWV++G     LN I+AGW+V+   
Sbjct: 181 HAVVFVNGDQYYGAKASINVWAPHVTDQYEFSLSQIWVISGSFGNDLNTIEAGWQVSPEL 240

Query: 57  -GEKDTRFYSYWTRDNYQSTGCYNLDCPGFVQTNHRIAFGAAIEPISKYDGPQYSIDITI 115
            G+   RF++YWT D YQ+TGCYNL C GFVQTN++IA GAAI P S ++G Q+ I + +
Sbjct: 241 YGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNKIAIGAAISPRSSFNGRQFDIGLMV 300

Query: 116 HKDMKSGNWWLQV-HGQEVGYWPPSILTSLANRSTLINWGGLVVNFQYHGRHTSTQMGSG 174
            KD K GNWWL+   G  VGYWP  + + L + ++++ +GG +VN +  G HTSTQMGSG
Sbjct: 301 WKDPKHGNWWLEFGSGLLVGYWPAFLFSHLRSHASMVQFGGEIVNSRSSGYHTSTQMGSG 360

Query: 175 LFPGEGFGKASAFWGLGYIDNLGKMRDPEHLMPYVTKPSCYDLKVGKKNKDFGVHFYYGG 234
            F  EGFGKAS F  L  +D    +    +L      P+CYD++ GK N  +G +FYYGG
Sbjct: 361 HFAEEGFGKASYFRNLQVVDWDNNLLPLTNLHLLADHPNCYDIRQGKNNV-WGTYFYYGG 419

Query: 235 PG 236
           PG
Sbjct: 420 PG 421


>27504.m000619 conserved hypothetical protein
          Length = 369

 Score =  132 bits (331), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 37/248 (14%)

Query: 1   HAQVSADGGNFLGAQARLNVWNPATFGT-EVSSAQIWVVAGR-DQGLNFIQAGWKVNK-- 56
           HA     G  + GA+A +NVW P      E S +Q+WV++G     LN I+AGW+V+   
Sbjct: 151 HAVGYVSGDQYYGAKASINVWAPRVSNQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPEL 210

Query: 57  -GEKDTRFYSYWTRDNYQSTGCYNLDCPGFVQTNHRIAFGAAIEPISKYDGPQYSIDITI 115
            G+   RF++YWT                             +   +K  G   S+ + +
Sbjct: 211 YGDNYPRFFTYWT-----------------------------VSIRNKSFGLCNSLFLVL 241

Query: 116 -HKDMKSGNWWLQV-HGQEVGYWPPSILTSLANRSTLINWGGLVVNFQYHGRHTSTQMGS 173
              D K GNWWL+  +G  VGYWP  + T L + ++++ +GG VVN +  G HTSTQMGS
Sbjct: 242 PSSDPKHGNWWLEFGNGVLVGYWPSFLFTHLRDHASMVQFGGEVVNSRPSGFHTSTQMGS 301

Query: 174 GLFPGEGFGKASAFWGLGYIDNLGKMRDPEHLMPYVTKPSCYDLKVGKKNKDFGVHFYYG 233
           G F GEGFGKAS F  L  +D    +    +L      P+CYD++ G  N+ +G +FYYG
Sbjct: 302 GHFAGEGFGKASYFRNLQVVDWDNNLIPLSNLRVLADHPNCYDIQ-GGINRVWGNYFYYG 360

Query: 234 GPGFSPRC 241
           GPG + RC
Sbjct: 361 GPGRNVRC 368


>29794.m003358 conserved hypothetical protein
          Length = 189

 Score =  101 bits (252), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 97/198 (48%), Gaps = 30/198 (15%)

Query: 46  NFIQAGWKVNK---GEKDTRFYSYWTRDNYQSTGCYNLDCPGFVQTNHRIAFGAAIEPIS 102
           N  +AG  VN    G++ TR + Y+T D  + TGC+++ CPGFVQT+  +A GA I P++
Sbjct: 7   NSFEAGLGVNPSVYGDRQTRLFVYYTADASKKTGCFDITCPGFVQTSSEVALGATIYPLA 66

Query: 103 KYDGPQYSIDITIHKDMKSGNWWLQVHGQE---VGYWPPSILTSLANRSTLINWGGLVVN 159
                 Y I + I KD  + NWW+Q +G +   VGYWPP + T L   +    WGG V +
Sbjct: 67  VPFELPYQIILYIFKDPATSNWWVQ-YGDKINLVGYWPPHLFTLLHGNAQGAEWGGEVYS 125

Query: 160 FQY-HGRHTSTQMGSGLFPGEGFGKASAFWGLGYIDNLGKMRDPEHLMPYVTKPSCYDLK 218
            +     HT T MG+G +P   FG +      G + N        ++  Y+  P      
Sbjct: 126 LKLGCPPHTRTAMGNGQYPDGRFGYS------GTLKNEYDFYRTLYVGAYIEDP------ 173

Query: 219 VGKKNKDFGVHFYYGGPG 236
                      FYYGGPG
Sbjct: 174 ----------EFYYGGPG 181


>30190.m011172 conserved hypothetical protein
          Length = 407

 Score = 80.9 bits (198), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 13/143 (9%)

Query: 19  NVWNPATFGTEVSSAQIWVVAGRDQGLNFIQAGWKVNKG---EKDTRFYSYWTRDNYQST 75
           +V+NP   G++ SSA++ +  G +     I+ GW VN     +  TR Y Y    N   +
Sbjct: 187 SVYNPQVVGSQYSSARLKIQNGPES----IEVGWMVNPSLNKDNRTRLYVY---TNAGES 239

Query: 76  GCYNLDCPGFVQTNHRIAFGAAIEPISKY--DGPQYSIDITIHKDMKSGNWWLQV-HGQE 132
            C+N  CPG +     I     +EP S     G +Y     I+KD  +GNW+L++ +G  
Sbjct: 240 HCFNAHCPGIITVRPDIPLDFILEPTSTRGSSGKRYVEQFFIYKDAANGNWFLEIGNGFV 299

Query: 133 VGYWPPSILTSLANRSTLINWGG 155
           +G+WP +  T+LAN +  + WGG
Sbjct: 300 IGFWPQTRFTTLANSANYVEWGG 322