Jatropha Genome Database

JcCB0138801.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0138801.10 + phase: 0 /partial
         (151 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30054.m000794 ribose-phosphate pyrophosphokinase, putative            167   2e-42
30054.m000790 ribose-phosphate pyrophosphokinase, putative            137   2e-33
29709.m001223 ribose-phosphate pyrophosphokinase, putative            108   1e-24

>30054.m000794 ribose-phosphate pyrophosphokinase, putative
          Length = 351

 Score =  167 bits (422), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 83/97 (85%), Positives = 88/97 (90%), Gaps = 1/97 (1%)

Query: 55  MAEPVNVGNGKPSIPILNERTLPKFLESARMEKSVNRNSTRLKLFSGSANPALSQEIAWY 114
           MAE VNV NGKPS P +NERTLPKFLESA  EKSV R+ST++KLFSGSANPALSQEIA  
Sbjct: 1   MAEAVNV-NGKPSSPTINERTLPKFLESALTEKSVKRSSTKIKLFSGSANPALSQEIASN 59

Query: 115 MGLELGKINIKRFADGEIYVQLQESVRGCDVYLLQPT 151
           MGLELGK+NIKRFADGEIYVQLQESVRGCDVYLLQPT
Sbjct: 60  MGLELGKVNIKRFADGEIYVQLQESVRGCDVYLLQPT 96


>30054.m000790 ribose-phosphate pyrophosphokinase, putative
          Length = 395

 Score =  137 bits (344), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 69/102 (67%), Positives = 81/102 (79%), Gaps = 11/102 (10%)

Query: 51  VKCDMAEPVNVGNGKPSIPILNER-TLPKFLESARMEKSVNRNSTRLKLFSGSANPALSQ 109
           V+CDMA            PI+++R TLPKFLESA ME SV+R+ + +KLFSGSANP+LSQ
Sbjct: 49  VRCDMAHS----------PIIDKRMTLPKFLESAHMENSVDRSVSGMKLFSGSANPSLSQ 98

Query: 110 EIAWYMGLELGKINIKRFADGEIYVQLQESVRGCDVYLLQPT 151
           EIA  +GLELG IN KRFADGEIY+QL+ESVRGCDVYLLQPT
Sbjct: 99  EIASSLGLELGMINTKRFADGEIYLQLKESVRGCDVYLLQPT 140


>29709.m001223 ribose-phosphate pyrophosphokinase, putative
          Length = 374

 Score =  108 bits (270), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 54/98 (55%), Positives = 72/98 (73%), Gaps = 9/98 (9%)

Query: 50  SVKCDMAEPVNVGNGKP--SIPILN--ERTLPKFLESA-----RMEKSVNRNSTRLKLFS 100
           +V+C++ EP+   NGKP   +P+L+  E++ P F+ S      +     +++ TRL++FS
Sbjct: 36  AVRCNLVEPLKFENGKPMPCVPLLSPIEQSFPNFIASKTHLEPKTTPRASKHDTRLRIFS 95

Query: 101 GSANPALSQEIAWYMGLELGKINIKRFADGEIYVQLQE 138
           G+ANPALSQEIA YMGLELGKI IKRFADGEIYVQLQE
Sbjct: 96  GTANPALSQEIACYMGLELGKIKIKRFADGEIYVQLQE 133