Jatropha Genome Database

JcCB0137471.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0137471.10 - phase: 0 /partial
         (130 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m006960 cystathionine beta-lyase, putative                      254   7e-69
29635.m000441 cystathionine gamma-synthase, putative                   90   2e-19
35398.m000036 cystathionine beta-lyase, putative                       52   1e-07

>30131.m006960 cystathionine beta-lyase, putative
          Length = 467

 Score =  254 bits (649), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 123/128 (96%), Positives = 125/128 (97%)

Query: 2   QDNAQKIAEFLAAHPQVKKVNYAGLPGHPGRDLHYSQAKGAGSVLSFLTGSLALSKHIVE 61
           QDNAQKIAEFLA HP+VKKVNYAGLPGHPGRDLHYSQAKGAGSVLSFLTGSL LSKHIVE
Sbjct: 339 QDNAQKIAEFLATHPRVKKVNYAGLPGHPGRDLHYSQAKGAGSVLSFLTGSLELSKHIVE 398

Query: 62  TTKYFSITVSFGSVKSLISMPCFMSHASIPAAVREARGLTEDLIRISVGIEDVNDLIADL 121
           TTKYFSITVSFGSVKSLISMPCFMSHASIPA VREARGLTEDLIRISVGIEDVNDLIADL
Sbjct: 399 TTKYFSITVSFGSVKSLISMPCFMSHASIPADVREARGLTEDLIRISVGIEDVNDLIADL 458

Query: 122 DYALRTGP 129
           D+ALRTGP
Sbjct: 459 DHALRTGP 466


>29635.m000441 cystathionine gamma-synthase, putative
          Length = 425

 Score = 90.1 bits (222), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 70/125 (56%), Gaps = 1/125 (0%)

Query: 4   NAQKIAEFLAAHPQVKKVNYAGLPGHPGRDLHYSQAKGAGSVLSF-LTGSLALSKHIVET 62
            A ++AE L AHP+VK V Y GLP HP   +   Q  G G V+SF + G L  +   V+ 
Sbjct: 300 TALRMAEILEAHPKVKHVYYPGLPSHPEYHIAKRQMTGFGGVVSFEVDGDLMTTIKFVDA 359

Query: 63  TKYFSITVSFGSVKSLISMPCFMSHASIPAAVREARGLTEDLIRISVGIEDVNDLIADLD 122
            K   I  SFG  +S++  P  MS+  +  + RE  G+ ++L+R S G+ED  D+ AD+ 
Sbjct: 360 LKIPYIAPSFGGCESIVDQPAIMSYWDLTQSEREKYGIKDNLVRFSFGVEDFEDMKADIL 419

Query: 123 YALRT 127
            AL T
Sbjct: 420 QALET 424


>35398.m000036 cystathionine beta-lyase, putative
          Length = 99

 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)

Query: 37  SQAKGAGSVLSF-LTGSLALSKHIVETTKYFSITVSFGSVKSLISMPCFMSHASIPAAVR 95
           +Q  GAGS  SF + G    S   +   + F + VS G  +SL S P   +H+ +P  VR
Sbjct: 7   AQCSGAGSTFSFDIKGGQPASFKFLNALQIFKLAVSLGGTESLASHPATTTHSGVPIDVR 66

Query: 96  EARGLTEDLIRISVGIE 112
              G+ E  IR+S+GIE
Sbjct: 67  HRIGVLESTIRLSIGIE 83