Jatropha Genome Database

JcCB0133321.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0133321.10 - phase: 0 
         (178 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29968.m000660 Anthranilate synthase component II, putative            337   1e-93
29434.m000029 Anthranilate synthase component II, putative             75   2e-14
28327.m000357 p-aminobenzoate synthase, putative                       63   7e-11
29728.m000797 Carbamoyl-phosphate synthase small chain, putative       49   2e-06

>29968.m000660 Anthranilate synthase component II, putative
          Length = 281

 Score =  337 bits (865), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 163/185 (88%), Positives = 173/185 (93%), Gaps = 7/185 (3%)

Query: 1   MGELGCHFEVYRNDELTVEELKRKNPRGVLISPGPGPPQDSGISLQTVLELGPLVPLFGE 60
           MGELGC+FEVYRNDELTVEELKRKNPRGVLISPGPG P+DSGISL+TVLELGPLVPLFG 
Sbjct: 97  MGELGCYFEVYRNDELTVEELKRKNPRGVLISPGPGEPRDSGISLETVLELGPLVPLFGV 156

Query: 61  CMGLQW-------KIVRSPYGVVHGKSSPVYYDEKGEDGLFSGLENPFTAGRYHSLVIEK 113
           CMGLQ        KIVRSPYGV+HGKSSPVYYDEKGEDGLFSGL NPFTAGRYHSLVIE 
Sbjct: 157 CMGLQCIGEAFGGKIVRSPYGVMHGKSSPVYYDEKGEDGLFSGLSNPFTAGRYHSLVIEN 216

Query: 114 DSFPSEELEITAWTEDGLIMAARHKKYKHLQGVQFHPESIITSEGKSIVRNFVKMIERKE 173
           DSFP+EELEITAWTEDGLIMAARHKKYKHLQGVQFHPESIITSEGK+IV+NF+K++ERKE
Sbjct: 217 DSFPTEELEITAWTEDGLIMAARHKKYKHLQGVQFHPESIITSEGKTIVQNFIKLVERKE 276

Query: 174 AESQN 178
           AESQN
Sbjct: 277 AESQN 281


>29434.m000029 Anthranilate synthase component II, putative
          Length = 188

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 15/169 (8%)

Query: 10  VYRNDELTVEELKRKNPRGVLISPGPGPPQDSGISLQTVLELGPLVPLFGECMGLQW--- 66
           +Y  D    +  K+ N   +++SPGPG P+++    + + +     P+ G C+G Q    
Sbjct: 28  LYNQDPNLYDMAKKAN--ALVLSPGPGWPKEANQMPKLIQDFYQTKPILGVCLGHQAIAE 85

Query: 67  ---KIVRSPYGVVHGKSSPVYYDEKGEDGLFSGLENPFTAGRYHSLVIEKDSFPSEELEI 123
                +R    V+HG+ S +  + +G   LF  L    T  RYHS+V+  D  P +   +
Sbjct: 86  TLGGTLRLAKRVMHGRQSTI--ETQGPSSLFRSLPQEITVMRYHSIVV--DQLP-KGFSV 140

Query: 124 TAW-TEDGLIMAARHKKYKHLQGVQFHPESIITSEGKSIVRNFVKMIER 171
           TA   +D  IMA  H     L G+QFHPESI T +G +++ NF+  I R
Sbjct: 141 TARDCDDQEIMAFEHHTLP-LFGLQFHPESIGTPDGMTMIANFIAAIPR 188


>28327.m000357 p-aminobenzoate synthase, putative
          Length = 914

 Score = 63.2 bits (152), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 72/132 (54%), Gaps = 19/132 (14%)

Query: 12  RNDELTVEEL-----KRKNPRGVLISPGPGPPQ---DSGISLQTVLELGPLVPLFGECMG 63
           +NDE T EE+     + K    ++ISPGPG P    D GI L+ +LE    +P+ G C+G
Sbjct: 116 KNDEWTWEEVCHYLYEEKAFDNIVISPGPGSPTCAADIGICLRLLLECRD-IPILGVCLG 174

Query: 64  LQW-------KIVRSPYGVVHGKSSPV-YYDEKGEDGLFSGLENPFTAGRYHSLVIEKDS 115
            Q        +IV +   V HG++S + ++  +    + SG E+ F   RYHSLVI+ DS
Sbjct: 175 HQALGYVHGAQIVHASEPV-HGRTSEIEHHGCRLFHNIPSGRESGFKVVRYHSLVIDADS 233

Query: 116 FPSEELEITAWT 127
            P E + I AWT
Sbjct: 234 LPKELVPI-AWT 244


>29728.m000797 Carbamoyl-phosphate synthase small chain, putative
          Length = 418

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 19/159 (11%)

Query: 1   MGELGCHFEVYRNDELTVEELKRKNPRGVLISPGPGPPQDSGISLQTVLELGPLVPLFGE 60
           +   GC   V  +    +E LK K P GVL S GPG P     +++TV EL   VP+FG 
Sbjct: 261 LASYGCKITVVPSKWPALETLKLK-PDGVLFSNGPGDPSAVPYAVETVKELLGKVPVFGI 319

Query: 61  CMGLQW-------KIVRSPYGVVHGKSSPVYYDEKGEDGLFSGLENPFTAGRYHSLVIEK 113
           CMG Q        K  +  +G  HG + PV         +         + + H+  ++ 
Sbjct: 320 CMGHQLLGQALGGKTFKMKFG-HHGGNHPVRNVRHNRVEI---------SAQNHNYAVDP 369

Query: 114 DSFPSEELEITAWTEDGLIMAARHKKYKHLQGVQFHPES 152
            S P E +E+T    +    A       ++  +Q+HPE+
Sbjct: 370 ASLP-EGVEVTHINLNDGSCAGLAYPVLNIMSLQYHPEA 407