Jatropha Genome Database

JcCB0133181.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0133181.10 - phase: 0 /partial
         (271 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30065.m001161 amine oxidase, putative                                 511   e-145
30128.m008623 Zeta-carotene desaturase, chloroplast precursor, p...   145   2e-35
29634.m002143 amine oxidase, putative                                  55   5e-08

>30065.m001161 amine oxidase, putative
          Length = 597

 Score =  511 bits (1316), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 240/265 (90%), Positives = 253/265 (95%)

Query: 1   CILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGEVRLNSRIKKVELNNDGT 60
           CILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDH+QSLGGEVRLNSRIKK+ELNNDG 
Sbjct: 296 CILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHVQSLGGEVRLNSRIKKIELNNDGA 355

Query: 61  VRSFLLNTGDVIEADAYVFATPVDILKLLLPDSWKEIPYFNKLEKLVGVPVINVHIWFDR 120
           V++FLLN G+VIE D YV ATPVDILKLLLPD+WKEIPYF KL+KLVGVPVINVHIWFDR
Sbjct: 356 VKNFLLNNGEVIEGDVYVVATPVDILKLLLPDNWKEIPYFKKLDKLVGVPVINVHIWFDR 415

Query: 121 KLKNAYDHLLFSRSSLLSVYADMSVTCKEYYSPNQSMLELVFAPAEEWISRSDSEIINAT 180
           KLKN YDHLLFSRS LLSVYADMSVTCKEYY+PNQSMLELVFAPAEEW+SRSD EII AT
Sbjct: 416 KLKNTYDHLLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWVSRSDEEIIEAT 475

Query: 181 MKELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDY 240
           M ELAKLFPDEI+ADQSKAKI+KYHVVKTPRSVYKT+PNCEPCRPLQRSP+EGFYLAGDY
Sbjct: 476 MMELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTVPNCEPCRPLQRSPIEGFYLAGDY 535

Query: 241 TKQKYLASMEGAVLSGKLCAQAIVQ 265
           TKQKYLASMEGAVLSGK CAQAIVQ
Sbjct: 536 TKQKYLASMEGAVLSGKYCAQAIVQ 560


>30128.m008623 Zeta-carotene desaturase, chloroplast precursor,
           putative
          Length = 964

 Score =  145 bits (366), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 151/293 (51%), Gaps = 31/293 (10%)

Query: 1   CILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGEVRLNSRIKKVELNNDGT 60
           C+L   + F  +   S +  L G+P   L  PI  +I+  GG   L    +++  +    
Sbjct: 273 CMLTIFSLFATKTEASLLRMLKGSPDVYLSGPIRKYIEDKGGRFHLRWGCRQILYDTSAD 332

Query: 61  VRSFLLNTG-------DVIEADAYVFATPVDILKLLLPDSWKEIPYFNKLEKLVGVPVIN 113
             +++            V++ADAYV A  V  +K LLP  W+E  +F+ + +LVGVPV+ 
Sbjct: 333 GETYVTGLAMSKSTNKKVVKADAYVAACDVPGIKRLLPSQWRESKFFDNIYELVGVPVVT 392

Query: 114 VHIWFD------------RKLKNA--YDHLLFSRSSLLSVYADMSVTCKE-YYSPNQ-SM 157
           V + +D            R+ + A   D+LL++  +  S +AD+++T  E YY   Q S+
Sbjct: 393 VQLRYDGWVTELQDLERSRQSRQAVGLDNLLYTPDADFSCFADLALTSPEDYYIEGQGSL 452

Query: 158 LELVFAPAEEWISRSDSEIINATMKELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTI 217
           L+ V  P + ++   + EII    K++  LFP          +++   VVK  +S+Y+  
Sbjct: 453 LQCVLTPGDPYMPLVNEEIIKRVSKQVLTLFPSS-----QGLEVIWSSVVKIGQSLYREG 507

Query: 218 PNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQVLAAG 270
           P  +P RP Q++PV+ F+LAG YTKQ Y+ SMEGA LSG+   QA   +  AG
Sbjct: 508 PGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGR---QASAYICEAG 557


>29634.m002143 amine oxidase, putative
          Length = 491

 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 104/257 (40%), Gaps = 49/257 (19%)

Query: 28  RLCMPIVDHIQSLGGEVRLNSRIKKVELNNDGTVRSFLLNTGDVIEADAYVFATPVDILK 87
           R  +P+++ +   G ++RL  R+ K+   ++G         G    ADA V A P+ +LK
Sbjct: 226 RGYLPVINTLAK-GLDIRLGHRVTKIVRRHNGV--KVTTEDGRTFMADAAVIAVPLGVLK 282

Query: 88  LL-------LPDSWKEIPYFNKLEKLVGVPVINVHIWFDRKLKNAYDHLLFSRSSLLSVY 140
                    LPD WKE     +  K +GV + N       K+   +D + +     L V 
Sbjct: 283 SRTITFEPRLPD-WKE-----EAIKDLGVGIEN-------KIVLHFDKVFWPNVEFLGVV 329

Query: 141 ADMSVTCKEYYSPNQSMLE--LVFAPAEEWIS----RSDSEIINATMKELAKLFPD---- 190
           ++ S  C  + + +++     LV+ PA +        SD    N    +L K+ P+    
Sbjct: 330 SETSYGCSYFLNLHKATGHSVLVYMPAGQLAKDIEKMSDEAAANFAFMQLKKILPEASDP 389

Query: 191 ------EIAADQSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQK 244
                    +D +      Y  V  P  +Y+ +          R PV+  + AG+ T   
Sbjct: 390 IQYLVSRWGSDVNSLGSYSYDTVGKPHDLYERL----------RVPVDNLFFAGEATSAS 439

Query: 245 YLASMEGAVLSGKLCAQ 261
           Y  S+ GA  +G + A+
Sbjct: 440 YPGSVHGAFSTGLMAAE 456