Jatropha Genome Database

JcCB0131991.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0131991.10 - phase: 2 /pseudo/partial
         (179 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30079.m000443 UDP-N-acetylglucosamine transferase subunit ALG14,...   194   1e-50

>30079.m000443 UDP-N-acetylglucosamine transferase subunit ALG14,
           putative
          Length = 167

 Score =  194 bits (494), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 91/110 (82%), Positives = 101/110 (91%)

Query: 66  MINVLSVLQKDWFTPRFYIAAATDNMSLQKARVLEDSLIDTTGDKVVSAKFMQIYRSREV 125
           MINVL +LQKD F PRFYIAAATDNMSLQKARVLED+ +DT G K +SAKFMQIYRSREV
Sbjct: 1   MINVLGILQKDRFMPRFYIAAATDNMSLQKARVLEDTFVDTPGGKEISAKFMQIYRSREV 60

Query: 126 GQSYITSIGTTLIAVAHALCLMIKIRPQVILCNGPGTCVPLCIIAY*FKV 175
           GQSYITSIGTTL+A+AHAL LMIKIRPQV+LCNGPGTC+PLC+IA+ FKV
Sbjct: 61  GQSYITSIGTTLLAIAHALWLMIKIRPQVVLCNGPGTCIPLCVIAFLFKV 110