Jatropha Genome Database

JcCB0131911.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0131911.20 + phase: 0 /partial
         (187 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29910.m000958 histidinol dehydrogenase, putative                      336   4e-93

>29910.m000958 histidinol dehydrogenase, putative
          Length = 479

 Score =  336 bits (862), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 162/186 (87%), Positives = 175/186 (94%)

Query: 1   MKSYQLSELSRTEVESLKARPRIDFFSIFSIVTPIVDDVRSRGDAAVKDYTTRFDKVKLE 60
           MKSY+LSEL+RTEV+SLKARPRIDF SIFSIV PIVD VRSRGDAAVK+YT RFDKV LE
Sbjct: 43  MKSYRLSELTRTEVDSLKARPRIDFSSIFSIVNPIVDGVRSRGDAAVKEYTARFDKVNLE 102

Query: 61  KIVEDVSELPDPELDAAVREAFDVAYDNIYAFHLAQKAAEKSVENMQGVRCKRVPRCISS 120
            IVE+VSELP+ E+DAAVREAFDVAYDNIYAFHLAQKAAEKSVENM+GVRCKRV R ISS
Sbjct: 103 NIVENVSELPEMEIDAAVREAFDVAYDNIYAFHLAQKAAEKSVENMKGVRCKRVARSISS 162

Query: 121 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTIVIATPPGQDGSICKEVLYCAKKAGVTHIL 180
           VGLYVPGGTAVLPSTALML++PAQIAGCKT+V+ATPP Q+G ICKEVLYCAKKAGVTHIL
Sbjct: 163 VGLYVPGGTAVLPSTALMLAIPAQIAGCKTVVLATPPTQEGIICKEVLYCAKKAGVTHIL 222

Query: 181 KAGGAQ 186
           KAGGAQ
Sbjct: 223 KAGGAQ 228