Jatropha Genome Database

JcCB0131141.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0131141.10 + phase: 0 /pseudo
         (202 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29711.m000333 mta/sah nucleosidase, putative                          270   3e-73

>29711.m000333 mta/sah nucleosidase, putative
          Length = 266

 Score =  270 bits (690), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 129/171 (75%), Positives = 146/171 (85%), Gaps = 1/171 (0%)

Query: 1   MAPHGEGSDAAGDTTVVQAEQ-RPISNILLIIAMQTEAMPVVNKFQLEEDQHAAFPKGVP 59
           MAP GEGSDAAG+  V++ EQ RPIS +L+IIAMQTEAMP+VNKFQL+E+ H+AFP+GVP
Sbjct: 1   MAPQGEGSDAAGEAMVLEVEQQRPISTVLIIIAMQTEAMPLVNKFQLQEEPHSAFPEGVP 60

Query: 60  WVWYHGVYNDLNINLVWPGKDPILGVDSVGTVSASLLTYAAIQALQPDLIINXXXXXXXX 119
           WV YHG+Y DL+IN+VWPGKD  LGVDSVGT+SASL+TYA+IQALQPDLIIN        
Sbjct: 61  WVRYHGIYKDLHINIVWPGKDSTLGVDSVGTISASLVTYASIQALQPDLIINAGTSGGFK 120

Query: 120 XXXXSIGDVYLASDVAFHDRRIPIPVFDLYGVGLRKAYSTPNLLKELNLKV 170
               SIGDVYL SDVAFHDRRIPIPVFDLYGVGLR+A STPNLLKELNLKV
Sbjct: 121 AKGASIGDVYLVSDVAFHDRRIPIPVFDLYGVGLRQACSTPNLLKELNLKV 171