Jatropha Genome Database

JcCB0130751.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0130751.20 + phase: 0 /partial
         (155 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29647.m002111 phenazine biosynthesis protein, putative                196   4e-51
29647.m002112 phenazine biosynthesis protein, putative                185   7e-48

>29647.m002111 phenazine biosynthesis protein, putative
          Length = 300

 Score =  196 bits (497), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 89/124 (71%), Positives = 104/124 (83%)

Query: 31  ESSLSFYQVDAFTDSAFMGNPAAVCLLEDEKNEKWLQAVATEFNLSETCYLTRITDGETV 90
           E  + ++ VDAFTDSAF GNPAAVCLLE+E+++KWLQ+VA EFNLSETCYLTRITD +T 
Sbjct: 3   EQLVKYFVVDAFTDSAFKGNPAAVCLLEEERDDKWLQSVAAEFNLSETCYLTRITDSDTN 62

Query: 91  SSNPRFHLRWFTPVAEIRLCGHATLAASHILFSNGWVNSSTIEFVTLSGFLIAKKVTEIS 150
           SSNPRFHLRWFTPV+E+ LCGHATLAASH LFSNG +NS  IEFVTLSG L AK++ E S
Sbjct: 63  SSNPRFHLRWFTPVSEVELCGHATLAASHALFSNGLLNSDIIEFVTLSGILTAKRIPETS 122

Query: 151 NREA 154
             + 
Sbjct: 123 KTDG 126


>29647.m002112 phenazine biosynthesis protein, putative
          Length = 489

 Score =  185 bits (470), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 87/114 (76%), Positives = 100/114 (87%), Gaps = 1/114 (0%)

Query: 38  QVDAFTDSAFMGNPAAVCLLEDEKNEKWLQAVATEFNLSETCYLTRITD-GETVSSNPRF 96
           +VDAFT+SAF GNPAAVCLLEDE+++KWLQ+VA EFN+SETCYLTRI+   +TV SNPRF
Sbjct: 199 EVDAFTNSAFKGNPAAVCLLEDERDDKWLQSVAAEFNISETCYLTRISHHSDTVPSNPRF 258

Query: 97  HLRWFTPVAEIRLCGHATLAASHILFSNGWVNSSTIEFVTLSGFLIAKKVTEIS 150
            LRWFTPVAE++LCGHATLAASH +FSNG VNS  IEF TLSG L AKKV+EIS
Sbjct: 259 RLRWFTPVAEVKLCGHATLAASHTIFSNGLVNSDIIEFDTLSGILTAKKVSEIS 312