Jatropha Genome Database
- JcCB0129341.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0129341.10 - phase: 0
(727 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30185.m000956 Auxin response factor, putative 820 0.0
29739.m003713 Auxin response factor, putative 238 1e-62
30170.m014161 Auxin response factor, putative 131 1e-30
29769.m000463 Auxin response factor, putative 130 2e-30
30111.m000734 Auxin response factor, putative 92 1e-18
30147.m014418 Auxin response factor, putative 89 1e-17
30068.m002516 hypothetical protein 85 1e-16
29609.m000587 Auxin response factor, putative 85 1e-16
30128.m008545 transcription factor, putative 79 9e-15
29742.m001397 Auxin response factor, putative 78 2e-14
29609.m000586 Auxin response factor, putative 57 3e-08
29647.m002032 transcription factor, putative 55 1e-07
30146.m003502 Auxin-responsive protein IAA6, putative 51 2e-06
>30185.m000956 Auxin response factor, putative
Length = 1109
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/732 (62%), Positives = 498/732 (68%), Gaps = 36/732 (4%)
Query: 1 MPWLGDDMYMKDPHSLPGLSLVQWMNMQQNPSLANSLQPNYMQSLSGSVLQNLPGADLSR 60
MPWLGDD+YMKDP SLPGLSL+QWMN+QQNPSLANS+QPNYMQSLSGSVLQNL GADLSR
Sbjct: 409 MPWLGDDIYMKDPQSLPGLSLMQWMNLQQNPSLANSMQPNYMQSLSGSVLQNLAGADLSR 468
Query: 61 QLGLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLNPLGSIIQSQHQLGDITQQPR 120
QLG S S LNPLG+IIQSQ QLGD +QQ R
Sbjct: 469 QLGFSAPQLPQSNNLQFNAQRLPQQAQLLDQLPKLQSLLNPLGTIIQSQQQLGDTSQQSR 528
Query: 121 QNLVTQTIPSSQVQPQNLQPQTLAQNTNIXXXXXXXXXXXXXRNISXXXXXXXXXXXXXX 180
QNL TQ IPSSQVQ Q LQPQTL QNTN+ RN
Sbjct: 529 QNLATQNIPSSQVQAQILQPQTLVQNTNMLQQQPSLKSHQLPRNHPQSMQQQQQSQQQHI 588
Query: 181 XXXXXXXXXXXXXXXXXVTQHLQMPDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
V+QHLQM DN
Sbjct: 589 MGQNQQPNVIQSQLPDQVSQHLQMSDNQYQHQLLQKLQQQQQSLLALQSLQQPSQFMQLQ 648
Query: 241 XDPQRQFLEASKSFARSMPANQLLEMPQTTPASLPQSNIIQQQMTKNGNQTNARLSHMPX 300
DPQRQ LEAS++F+R NQL EMPQTTP SLPQSNI QQQMTKN +QT+ R S +P
Sbjct: 649 -DPQRQLLEASQTFSRPTLPNQLPEMPQTTPTSLPQSNI-QQQMTKNSSQTSGRFSQLPQ 706
Query: 301 XXXXXXXXPGTLSEMPGHMGLTTSSVVNHSVANHLSIAGNIILTSAAGAGLSGITEEVPS 360
PG LSEM G MGL SS +N S AG+ IL +AAGAGLSG+TEEVPS
Sbjct: 707 QLKFQQQ-PGILSEMAGDMGLPPSSAINQH-----STAGSSILCAAAGAGLSGVTEEVPS 760
Query: 361 CSTSPSTNNCANLVQPM-NSRVHQNTVLGDDAAQSAATLLSPNALETMSCSANLVKDLQQ 419
CSTSPSTNN AN VQPM +S HQ+T LG+D AQSAATLLSP ALE +SC+AN++KD+QQ
Sbjct: 761 CSTSPSTNNFANAVQPMMSSLAHQSTTLGEDMAQSAATLLSPGALEPISCNANIIKDIQQ 820
Query: 420 KSDVKPSLNIAKNQSQGFFPPQTYLNGATAQADYLDXXXXXXXVCVSQNDVHLXXXXXXX 479
KSD+KPSLN+ K+Q+QGFF PQTYLN AT Q D+LD VCVSQN+
Sbjct: 821 KSDIKPSLNMTKHQNQGFFTPQTYLNAATVQTDFLDTSSSTTSVCVSQNNNS------SS 874
Query: 480 XXXXXMLLRDTSQDGELQADIRNSVPYGTNVESQLGVPMNSDNVLSEGVIGLGKDLPNNL 539
MLLRDT+QDGEL AD RN+VPYG+NV Q+GV +NSD+ L++G++GLGKD NNL
Sbjct: 875 CNPQSMLLRDTNQDGELPADPRNNVPYGSNVGGQVGVSLNSDHGLTKGIVGLGKDFSNNL 934
Query: 540 SSGCMLANCENSKDA----PSSMVSQSFGVPDMAFNSIDSTINDSSFLNRGPWAPPPQFQ 595
SSG MLANCEN+KD SSMVSQSFGVPDMAFNSIDSTINDSSF+NRGPWAPPPQFQ
Sbjct: 935 SSGGMLANCENAKDPQNELSSSMVSQSFGVPDMAFNSIDSTINDSSFMNRGPWAPPPQFQ 994
Query: 596 RMRTYTKVYCFGLLNAICTLASMQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQL 655
RMRTYTKVY KRGAVGRSIDITRYS Y ELKQDLARRFGIEGQL
Sbjct: 995 RMRTYTKVY-----------------KRGAVGRSIDITRYSGYVELKQDLARRFGIEGQL 1037
Query: 656 EDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNSVFP 715
EDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNS P
Sbjct: 1038 EDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNSGLP 1097
Query: 716 NQACSSSDNGNV 727
NQACSSSDNGN
Sbjct: 1098 NQACSSSDNGNA 1109
>29739.m003713 Auxin response factor, putative
Length = 1119
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 160/376 (42%), Positives = 203/376 (53%), Gaps = 63/376 (16%)
Query: 357 EVPSCSTSPSTNNCANLVQPMNSRVHQNTVLGDDAAQSAATLLSPNALETMSCSANLVKD 416
+ PSCSTSPSTNNC + P N + Q+ A ++S + +E + NLV++
Sbjct: 787 DAPSCSTSPSTNNCQ--ISPSN--------FLNRNQQAPALMMSDSVVEP---ATNLVQE 833
Query: 417 LQQKSD--VKPSLNIAKNQSQGFFPPQTYLNGATAQADYLDXXXXXXXVCVSQNDVHLXX 474
L KSD VK +K Q L D L+ C+ ++
Sbjct: 834 LNGKSDIRVKHEFPGSKGADQ--------LKYKGTMTDQLEASSSGTSYCLDAGNIQQNF 885
Query: 475 XXXXXXXXXXMLLRDTSQDGELQADIRNSVPYGTNVESQLGVPMNSDNVLSEGVIGLGKD 534
T ++Q+ RNS+P+ N++S + D +LS G KD
Sbjct: 886 SIP------------TFGLDDVQSHPRNSLPFANNIDS-----LAPDTLLSRGYDS-QKD 927
Query: 535 LPNNLSSGCMLANCENSKDAPSSMVSQSFGVPDMAFN---SIDSTINDSSFLNRGPWAPP 591
L N LS+ ++ + +++ SQSFGVP++ F S D INDS LN G WA
Sbjct: 928 LQNLLSNYGGTPRDIETELSTAAISSQSFGVPNIPFKPGCSNDVAINDSGVLNGGLWAN- 986
Query: 592 PQFQRMRTYTKVYCFGLLNAICTLASMQVYKRGAVGRSIDITRYSDYDELKQDLARRFGI 651
Q QRMRTYTKV KRG+VGRSID+TRY YDEL+ DLAR FGI
Sbjct: 987 -QTQRMRTYTKVQ-----------------KRGSVGRSIDVTRYKGYDELRHDLARMFGI 1028
Query: 652 EGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGN 711
EGQLED Q WKLVYVDHEND+LLVGDDPWEEFV+CV+ IKILS EVQQMSLDGD G+
Sbjct: 1029 EGQLEDPQSSDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGS 1088
Query: 712 SVFPNQACSSSDNGNV 727
PNQACS +D+GN
Sbjct: 1089 VPVPNQACSGTDSGNA 1104
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 25/32 (78%), Gaps = 2/32 (6%)
Query: 1 MPWLGDDMYMKDPHS--LPGLSLVQWMNMQQN 30
MPWLGDD +KD S PGLSLVQWM+MQQN
Sbjct: 394 MPWLGDDFGLKDTQSSIFPGLSLVQWMSMQQN 425
>30170.m014161 Auxin response factor, putative
Length = 950
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 77/112 (68%), Gaps = 17/112 (15%)
Query: 596 RMRTYTKVYCFGLLNAICTLASMQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQL 655
R+RTYTKV K G+VGRSID++ + +Y+EL + FG+EG L
Sbjct: 834 RVRTYTKVQ-----------------KAGSVGRSIDVSGFKNYEELCSAIECMFGLEGLL 876
Query: 656 EDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDG 707
+ + GWKLVYVD+ENDVLL+GDDPWEEFV CVRCI+ILSP EVQQMS +G
Sbjct: 877 NNPRESGWKLVYVDYENDVLLIGDDPWEEFVGCVRCIRILSPSEVQQMSEEG 928
>29769.m000463 Auxin response factor, putative
Length = 826
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 75/90 (83%)
Query: 618 MQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLV 677
++VYK G+VGRS+DI+R+S Y EL+++LA+ FGIEG+LE+ R GW+LV+VD ENDVLL+
Sbjct: 728 VKVYKLGSVGRSLDISRFSSYHELREELAQMFGIEGKLENPHRSGWQLVFVDRENDVLLL 787
Query: 678 GDDPWEEFVNCVRCIKILSPQEVQQMSLDG 707
GDDPWE FVN V IKILSP++VQ+M G
Sbjct: 788 GDDPWEAFVNNVWYIKILSPEDVQKMGEQG 817
>30111.m000734 Auxin response factor, putative
Length = 810
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 65/88 (73%), Gaps = 2/88 (2%)
Query: 619 QVYKRGA-VGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLV 677
+V+K+G+ VGR+ID++R + Y +L +L R F +EG L+D + GW+++Y D ENDV++V
Sbjct: 670 KVHKQGSLVGRAIDLSRLNGYSDLLSELERLFSMEGLLQDPNK-GWRILYTDSENDVMVV 728
Query: 678 GDDPWEEFVNCVRCIKILSPQEVQQMSL 705
GDDPW EF N V I I + +EV++M++
Sbjct: 729 GDDPWHEFCNVVSKIHIYTQEEVEKMTI 756
>30147.m014418 Auxin response factor, putative
Length = 844
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 71/112 (63%), Gaps = 3/112 (2%)
Query: 593 QFQRMRTYTKVYCFGLLNAICTLASMQVYKRG-AVGRSIDITRYSDYDELKQDLARRFGI 651
QFQ +T+ G T + +V+K+G A+GRS+D+ ++++YDEL +L R F
Sbjct: 697 QFQSGHLHTRDIQ-GKTQTGSTRSCTKVHKQGIALGRSVDLAKFNNYDELIAELDRLFEF 755
Query: 652 EGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQM 703
G+L ++ W +VY D E D++LVGDDPW+EFV VR I I + +EVQ+M
Sbjct: 756 GGELISPKK-NWLIVYTDDEGDMMLVGDDPWQEFVGMVRKIFIYTREEVQKM 806
>30068.m002516 hypothetical protein
Length = 694
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Query: 625 AVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEE 684
AVGR+ID+T Y++L +L F I+GQL R + W++VY D E D++LVGDDPW E
Sbjct: 593 AVGRAIDLTMIKGYNQLLDELEEMFDIKGQLHPRDK--WEIVYTDDEGDMMLVGDDPWPE 650
Query: 685 FVNCVRCIKILSPQEVQQM 703
F N VR I I S Q+V++M
Sbjct: 651 FCNMVRRIFICSSQDVKKM 669
>29609.m000587 Auxin response factor, putative
Length = 671
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 61/92 (66%), Gaps = 4/92 (4%)
Query: 613 CTLASMQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEN 672
CT MQ AVGR++D+TR+ Y++L + L F IEG+L + W++VY D E+
Sbjct: 547 CTKVHMQGI---AVGRAVDLTRFECYEDLLRKLEEMFDIEGELSGFSK-KWQVVYTDDED 602
Query: 673 DVLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 704
D+++VGDDPW EF + VR I I + +EV+++S
Sbjct: 603 DMMMVGDDPWHEFCSMVRKIFIYTSEEVKRLS 634
>30128.m008545 transcription factor, putative
Length = 787
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Query: 618 MQVYKRG-AVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLL 676
++V+K+G AVGR +D+T+++ Y+EL +L R F G+L + W + + D E D++L
Sbjct: 677 VKVHKQGIAVGRYVDLTKFNGYNELIAELDRIFEFSGELITSNK-NWLIAFTDDEGDMML 735
Query: 677 VGDDPWEEFVNCVRCIKILSPQEVQQM 703
VGDDPWEEF + VR I + + +E+ +M
Sbjct: 736 VGDDPWEEFCSMVRRIFVYTREEINRM 762
>29742.m001397 Auxin response factor, putative
Length = 667
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 625 AVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEE 684
AVGR++D+T Y +L ++L F I+G+L R++ W +V+ D E D++LVGDDPW E
Sbjct: 563 AVGRAVDLTALKGYGDLIKELEELFEIKGELSTREK--WAVVFTDDEGDMMLVGDDPWRE 620
Query: 685 FVNCVRCIKILSPQEVQQM 703
F VR I I S +E +++
Sbjct: 621 FCKMVRKILIYSSEEAKKL 639
>29609.m000586 Auxin response factor, putative
Length = 620
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 625 AVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEE 684
A+GRSID+T++ +++L ++L F IEG+L + W +VY D ++++ LVGD WE
Sbjct: 548 ALGRSIDLTKFKCHEDLIKELENMFEIEGELSGSTK-KWLIVYTDADSEMKLVGDYQWEV 606
Query: 685 FVNCVRCIKI 694
N V+ I I
Sbjct: 607 VCNMVKKILI 616
>29647.m002032 transcription factor, putative
Length = 634
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Query: 605 CFGLLNAICTLASMQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWK 664
C N CT +V K G+ GRS+DIT++ YD+L ++L + F +G L D GW+
Sbjct: 544 CCSFTNLSCT----KVLKHGSAGRSVDITKFDGYDKLIRELDQMFDFKGTLIDGSS-GWE 598
Query: 665 LVYVDHENDVLL 676
+ Y D E D++L
Sbjct: 599 VTY-DDEGDIML 609
>30146.m003502 Auxin-responsive protein IAA6, putative
Length = 320
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 18/97 (18%)
Query: 626 VGRSIDITRYSDY-------DELKQDL--ARRFGIEG--QLEDRQRIG-------WKLVY 667
+GR +D+ Y Y DEL + L A+R G Q E++ G + LVY
Sbjct: 222 IGRKVDLQAYDSYEKLSIAVDELFRGLLAAQRDSSAGTKQEEEKAITGVLDGSGEYTLVY 281
Query: 668 VDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 704
D+E D +LVGD PW FV+ V+ +++L EV +S
Sbjct: 282 EDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEVSALS 318