Jatropha Genome Database

JcCB0128551.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0128551.10 + phase: 0 /pseudo/partial
         (257 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29588.m000853 conserved hypothetical protein                          350   4e-97
29848.m004548 nucleic acid binding protein, putative                  243   9e-65
29588.m000855 conserved hypothetical protein                          231   2e-61
29920.m000101 androgen induced inhibitor of proliferation (as3) ...   154   3e-38
29908.m006181 androgen induced inhibitor of proliferation (as3) ...   121   3e-28
29737.m001210 hypothetical protein                                     62   3e-10
51390.m000011 conserved hypothetical protein                           56   2e-08

>29588.m000853 conserved hypothetical protein
          Length = 552

 Score =  350 bits (898), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 174/237 (73%), Positives = 202/237 (85%)

Query: 1   RLEVSLSKVTQSPSASMIAALSPSRNALVSDKLLRHSDTDVKVSVAVCISEIMRITAPNA 60
           R+EVSLSKV QSP  SM+AALSP R ALVSDKLLRHSDTDVKV+VA CIS+I+RITAP A
Sbjct: 33  RIEVSLSKVNQSPHGSMVAALSPLRIALVSDKLLRHSDTDVKVAVAACISQIIRITAPEA 92

Query: 61  PYGDEQMKEVFHLILAVFQKLSHMSSCCYSKVVSVLVTIATIRAIVVMVDLECHSLIVDM 120
           PY D++M EVFHLI+A FQKLSHMSSCCYSKVVS+LVTIAT RA+VVM+DL+CH LIV+M
Sbjct: 93  PYDDKKMTEVFHLIVAAFQKLSHMSSCCYSKVVSILVTIATTRAVVVMMDLDCHELIVEM 152

Query: 121 FHLFLRVTRSNSSDVVLSAMVSTMTIAILESDEISLEILFPLLASVRKENQNVFSTSWKL 180
           F LFL +TRSN+SDVV +AMV+ MTIAILESD+ISLEI+  LL SVRKENQNV   SWKL
Sbjct: 153 FQLFLIITRSNNSDVVSAAMVAIMTIAILESDDISLEIVNSLLVSVRKENQNVAPASWKL 212

Query: 181 GKEVIGNCAAKIQPYVLKAVNSLGVSVDSYDEVIASICRNATDNVKSFYAPDSEKHL 237
           GKEVI NCAAKI P +L+ V SLGVS+D+YD++I SIC+ AT N+KSF    SE+ L
Sbjct: 213 GKEVIKNCAAKIGPCILRTVKSLGVSLDNYDQIIYSICQKATSNIKSFDLHSSEERL 269


>29848.m004548 nucleic acid binding protein, putative
          Length = 953

 Score =  243 bits (619), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 119/225 (52%), Positives = 166/225 (73%)

Query: 1   RLEVSLSKVTQSPSASMIAALSPSRNALVSDKLLRHSDTDVKVSVAVCISEIMRITAPNA 60
           ++E  LSKV QSP+ASM +ALSPS+NALV+D L RHSD DVKV+VA CISEI RITAP+A
Sbjct: 35  QVENCLSKVEQSPTASMKSALSPSQNALVADPLFRHSDIDVKVAVASCISEITRITAPDA 94

Query: 61  PYGDEQMKEVFHLILAVFQKLSHMSSCCYSKVVSVLVTIATIRAIVVMVDLECHSLIVDM 120
           PY D+QMK+VF LI++ F+ L+  SS  Y K  S+L T+A +R+ VVM+DLEC +LI++M
Sbjct: 95  PYDDDQMKDVFQLIVSSFENLADKSSRSYGKRTSILETVAKVRSCVVMLDLECDALIIEM 154

Query: 121 FHLFLRVTRSNSSDVVLSAMVSTMTIAILESDEISLEILFPLLASVRKENQNVFSTSWKL 180
           F  FL   R    + V S+M + MT+ + ES+EIS E+L PLLAS +K N+ V   + KL
Sbjct: 155 FQHFLSAIRDCHPENVFSSMETIMTLVLEESEEISPELLSPLLASAKKGNEEVLPVARKL 214

Query: 181 GKEVIGNCAAKIQPYVLKAVNSLGVSVDSYDEVIASICRNATDNV 225
           G++V+ +CAAK++PY+  AV SL +S+D Y +++ SIC+  + +V
Sbjct: 215 GEKVLESCAAKVKPYLQHAVTSLCISLDDYSDIVGSICQEMSGSV 259


>29588.m000855 conserved hypothetical protein
          Length = 635

 Score =  231 bits (590), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 121/241 (50%), Positives = 165/241 (68%)

Query: 1   RLEVSLSKVTQSPSASMIAALSPSRNALVSDKLLRHSDTDVKVSVAVCISEIMRITAPNA 60
           +LE  L  V Q+PS SM  AL PS  AL+S+ LLR+SD DVKVSV  C+SE  RITAP+ 
Sbjct: 35  KLEHLLINVEQAPSKSMQDALLPSMKALISNALLRNSDPDVKVSVVSCLSEFTRITAPDP 94

Query: 61  PYGDEQMKEVFHLILAVFQKLSHMSSCCYSKVVSVLVTIATIRAIVVMVDLECHSLIVDM 120
           PY D+ MKE+F L +A F+KLSH+SS CY K VS+L T+A +R+ ++M+DLE   LI+ +
Sbjct: 95  PYNDDHMKEIFELTVAAFEKLSHVSSRCYMKAVSILDTVARVRSCLIMLDLELDELIIKI 154

Query: 121 FHLFLRVTRSNSSDVVLSAMVSTMTIAILESDEISLEILFPLLASVRKENQNVFSTSWKL 180
           F  FL++ RSN    V  AM + MT+ I ESD IS+ +L  LLASVRKENQ+    +WKL
Sbjct: 155 FQHFLKIIRSNHPHAVFLAMETIMTLIINESDTISMGLLTALLASVRKENQSASPIAWKL 214

Query: 181 GKEVIGNCAAKIQPYVLKAVNSLGVSVDSYDEVIASICRNATDNVKSFYAPDSEKHLVSM 240
           G++VI N AAK++PY+ +A++  G + D Y  +IASIC++ +  V   +   S  HLV+ 
Sbjct: 215 GEKVIVNSAAKLKPYIKEALHCDGRAFDEYAPIIASICQDESHTVVHDHVNGSRDHLVTK 274

Query: 241 E 241
           E
Sbjct: 275 E 275


>29920.m000101 androgen induced inhibitor of proliferation (as3) /
           pds5, putative
          Length = 1735

 Score =  154 bits (390), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 77/191 (40%), Positives = 121/191 (63%)

Query: 6   LSKVTQSPSASMIAALSPSRNALVSDKLLRHSDTDVKVSVAVCISEIMRITAPNAPYGDE 65
           L ++ QSPSA+++ ++ P  NA+V  +LL+H D DVK+ VA CI EI RITAP APY D+
Sbjct: 37  LPEMDQSPSATVLESMQPFLNAIVKPELLKHQDRDVKLLVATCICEITRITAPEAPYSDD 96

Query: 66  QMKEVFHLILAVFQKLSHMSSCCYSKVVSVLVTIATIRAIVVMVDLECHSLIVDMFHLFL 125
            +K++FHLI+  F  LS  S   + + V +L T+A  R+ VVM+DLEC  L+  MF  F 
Sbjct: 97  ILKDIFHLIVGTFSGLSDTSGPSFGRRVVILETLAKYRSCVVMLDLECDDLVNTMFSTFF 156

Query: 126 RVTRSNSSDVVLSAMVSTMTIAILESDEISLEILFPLLASVRKENQNVFSTSWKLGKEVI 185
            V   +  D VLS+M + M + I ES+++  ++LF +L+ + ++  ++ S + +L   VI
Sbjct: 157 TVASDDHQDSVLSSMKTIMAVLIEESEDVREDLLFIVLSVLGRDRSDISSAARRLAMNVI 216

Query: 186 GNCAAKIQPYV 196
              A K++P +
Sbjct: 217 EQGAGKLEPGI 227


>29908.m006181 androgen induced inhibitor of proliferation (as3) /
           pds5, putative
          Length = 1332

 Score =  121 bits (304), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 121/195 (62%), Gaps = 2/195 (1%)

Query: 17  MIAALSPSRNALVSDKLLRHSDTDVKVSVAVCISEIMRITAPNAPYGDEQMKEVFHLILA 76
           + + + P   + V   LLR+SD DVK+ VA+CISEI RI AP  P+ D+ +++VF LIL+
Sbjct: 59  LASGIKPLGKSFVKHGLLRNSDKDVKLLVAICISEIFRILAPEPPFEDKYLRDVFKLILS 118

Query: 77  VFQKLSHMSSCCYSKVVSVLVTIATIRAIVVMVDLECHSLIVDMFHLFLRVTRSNSSDVV 136
           +F +L+  +S  +S+ V +L T+A  +  V+++D++C+ L+++MF++F  + R N    +
Sbjct: 119 MFAELADTTSPYFSRRVKILETVARCKCFVILLDIDCNDLVLEMFNIFFSIVRENHQRSL 178

Query: 137 LSAMVSTMTIAILESDEISLEILFPLLASVRKENQNVFSTSWKLGKEVIGNCAAKIQPYV 196
           ++ ++S MT  +  ++E SL +   +L ++ KE     + + +L   VI +CA K++P++
Sbjct: 179 INDVLSIMTHIL--NEEASLPLSDVILRNLVKEGTAASAAASQLAASVIQSCAEKLEPFI 236

Query: 197 LKAVNSLGVSVDSYD 211
              + S  +  D+ D
Sbjct: 237 CGFLTSCSLDRDAID 251


>29737.m001210 hypothetical protein
          Length = 397

 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 3/89 (3%)

Query: 8   KVTQSPSASMIAALSPSRNALVSDKLLRHSDTDVKVSVAVCISEIMRITAPNAPYGDEQM 67
           +  QS S  +  AL  + NAL + +LL + + DVKVSVA C  EIMR TAP+AP GDEQ+
Sbjct: 47  ETKQSASNYVQKALRSAMNALTTKELLNNLNVDVKVSVASCSCEIMRCTAPDAPCGDEQL 106

Query: 68  KEVFHLILAVFQKLSHMSSCCYSKVVSVL 96
           K V  +   + +++      C SK+V  +
Sbjct: 107 KSVLPITRKLGERVIEN---CVSKLVPYM 132


>51390.m000011 conserved hypothetical protein
          Length = 141

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 36/48 (75%)

Query: 33  LLRHSDTDVKVSVAVCISEIMRITAPNAPYGDEQMKEVFHLILAVFQK 80
           LL + + DVKVSVA CI EIMR TAP+AP GDEQMK++  + + V ++
Sbjct: 56  LLNNLNVDVKVSVASCICEIMRSTAPDAPCGDEQMKKLRGMTMEVKKE 103