Jatropha Genome Database

JcCB0125821.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0125821.20 - phase: 0 /partial
         (101 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29842.m003510 alkaline phytoceramidase, putative                      179   3e-46
29904.m002905 alkaline phytoceramidase, putative                      111   6e-26

>29842.m003510 alkaline phytoceramidase, putative
          Length = 255

 Score =  179 bits (453), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 83/98 (84%), Positives = 88/98 (89%)

Query: 1   YKYYIHTEDASAKRLAKLYVATLFTGSLSWLFDRIFCKNISNWPINPQGHALWHVFMGFN 60
           YKYYI+T+DA+AK LAKLYVATLF GSL WL DRIFCK ISNWPINPQGHALWHVFMGFN
Sbjct: 156 YKYYIYTQDAAAKWLAKLYVATLFIGSLCWLCDRIFCKKISNWPINPQGHALWHVFMGFN 215

Query: 61  SYFANTFLMFCRAHQRGWAPKVGYFGGVLPYVKIEKSK 98
           SYFANTFLMFCRA QRGW+PKV  F G+LPYVKIEK K
Sbjct: 216 SYFANTFLMFCRAEQRGWSPKVVCFAGILPYVKIEKPK 253


>29904.m002905 alkaline phytoceramidase, putative
          Length = 234

 Score =  111 bits (278), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 58/98 (59%), Positives = 60/98 (61%), Gaps = 21/98 (21%)

Query: 1   YKYYIHTEDASAKRLAKLYVATLFTGSLSWLFDRIFCKNISNWPINPQGHALWHVFMGFN 60
           YKYYI+T D SAKRLAKLYV                      W  NPQGHALWHV MGFN
Sbjct: 156 YKYYIYTNDVSAKRLAKLYVG---------------------WSFNPQGHALWHVLMGFN 194

Query: 61  SYFANTFLMFCRAHQRGWAPKVGYFGGVLPYVKIEKSK 98
           SYFANTFLMFCRA Q GW PKV    G  PYVK+ K K
Sbjct: 195 SYFANTFLMFCRAQQLGWNPKVVDLLGFFPYVKVRKPK 232